Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm45101-201ENSMUST00000208327 232 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm26066-201ENSMUST00000083385 109 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm23472-201ENSMUST00000101806 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Snord19-201ENSMUST00000104609 76 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm12797-201ENSMUST00000118645 273 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm11572-201ENSMUST00000119164 120 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm26026-201ENSMUST00000122726 123 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm24392-201ENSMUST00000158136 103 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm25923-201ENSMUST00000158312 138 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm24131-201ENSMUST00000158539 107 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm24667-201ENSMUST00000158938 103 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm24497-201ENSMUST00000177868 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm38076-201ENSMUST00000193889 450 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm25203-202ENSMUST00000200458 216 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm45315-201ENSMUST00000209283 333 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm25813-201ENSMUST00000082748 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm24950-201ENSMUST00000082768 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm25203-201ENSMUST00000082842 215 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm23444-201ENSMUST00000082922 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm25140-201ENSMUST00000083254 140 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm23971-201ENSMUST00000083317 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm23849-201ENSMUST00000083833 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm26316-201ENSMUST00000083886 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Trim47Q8C0E3 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.31□□□□□ -1.56
Trim47Q8C0E3 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm12379-201ENSMUST00000119607 391 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm12495-201ENSMUST00000119750 447 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm11584-201ENSMUST00000120636 325 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm25520-201ENSMUST00000158389 118 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm29031-201ENSMUST00000185316 614 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm29000-201ENSMUST00000185444 614 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm28204-201ENSMUST00000185934 614 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm28290-201ENSMUST00000186505 614 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm28161-201ENSMUST00000186669 614 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm28749-209ENSMUST00000189599 614 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm33163-201ENSMUST00000194504 614 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm42643-201ENSMUST00000200504 279 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm45772-201ENSMUST00000212961 240 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 LOC667541-201ENSMUST00000223408 278 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 AC172751.1-201ENSMUST00000226887 440 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm25814-201ENSMUST00000082754 107 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Mir302d-201ENSMUST00000083513 66 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm24031-201ENSMUST00000083930 131 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.3□□□□□ -1.56
Trim47Q8C0E3 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Mir599-201ENSMUST00000102378 88 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm25560-201ENSMUST00000104606 176 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm5379-201ENSMUST00000120973 826 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms