Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm25315-201ENSMUST00000116823 121 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm15783-201ENSMUST00000117521 633 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm14541-201ENSMUST00000118985 157 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm12515-201ENSMUST00000120116 361 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm13557-201ENSMUST00000120771 382 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Mir1898-201ENSMUST00000122643 83 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm23602-201ENSMUST00000157258 132 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm25438-201ENSMUST00000158281 110 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm22840-201ENSMUST00000158444 136 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm22434-201ENSMUST00000158549 122 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm4076-201ENSMUST00000179230 965 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm38076-201ENSMUST00000193889 450 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm19649-201ENSMUST00000201126 822 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm3867-201ENSMUST00000086108 279 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.6□□□□□ -1.83
Usp43Q8BUM9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm22656-201ENSMUST00000104199 171 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm11874-201ENSMUST00000117437 130 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm5762-201ENSMUST00000119204 258 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm14049-201ENSMUST00000121009 636 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm14101-201ENSMUST00000121502 473 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm14810-201ENSMUST00000121628 486 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm26171-201ENSMUST00000158422 131 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm26402-201ENSMUST00000158499 113 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm23702-201ENSMUST00000158840 130 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm23775-201ENSMUST00000158991 249 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm24810-201ENSMUST00000175317 70 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm22290-201ENSMUST00000177655 107 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm22583-201ENSMUST00000178031 107 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm24968-201ENSMUST00000179817 107 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm26960-201ENSMUST00000182263 412 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm29134-201ENSMUST00000186579 126 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm28141-201ENSMUST00000186676 342 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm28148-201ENSMUST00000186924 697 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm28241-201ENSMUST00000190916 235 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm38050-201ENSMUST00000191904 238 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm43405-201ENSMUST00000198642 337 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm44059-201ENSMUST00000204048 351 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm44092-201ENSMUST00000204470 258 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm19726-201ENSMUST00000205008 240 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Mir132-201ENSMUST00000083603 66 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Usp43Q8BUM9 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Usp43Q8BUM9 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.59□□□□□ -1.84
Usp43Q8BUM9 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm26396-201ENSMUST00000104093 132 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm26145-201ENSMUST00000104476 127 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm13806-201ENSMUST00000117822 325 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm13064-201ENSMUST00000119125 557 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm11606-201ENSMUST00000120706 617 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm25105-201ENSMUST00000122477 130 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm22034-201ENSMUST00000157283 134 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm23540-201ENSMUST00000157543 164 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm24100-201ENSMUST00000178592 79 ntBASIC3.58□□□□□ -1.84
Usp43Q8BUM9 Gm25314-201ENSMUST00000178810 79 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms