Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Clrn3Q8BHH8 Gm28354-201ENSMUST00000190904 678 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.53□□□□□ -2
Clrn3Q8BHH8 Gm15235-201ENSMUST00000200572 194 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Gm44399-201ENSMUST00000205043 226 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.53□□□□□ -2
Clrn3Q8BHH8 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Clrn3Q8BHH8 Gm23296-201ENSMUST00000082555 107 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Gm24859-201ENSMUST00000082729 107 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Gm23932-201ENSMUST00000082914 107 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Gm23096-201ENSMUST00000083447 107 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.53□□□□□ -2
Clrn3Q8BHH8 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.53□□□□□ -2
Clrn3Q8BHH8 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.53□□□□□ -2
Clrn3Q8BHH8 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Clrn3Q8BHH8 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm25313-201ENSMUST00000101817 116 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm7974-201ENSMUST00000117154 408 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm11490-201ENSMUST00000118128 272 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm12819-201ENSMUST00000122223 629 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm24291-201ENSMUST00000157633 162 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm25666-201ENSMUST00000157702 107 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm24436-201ENSMUST00000157889 302 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Snord53-201ENSMUST00000175146 78 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Mir3965-201ENSMUST00000175570 69 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm18397-201ENSMUST00000176704 587 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm23287-201ENSMUST00000179427 116 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm23143-201ENSMUST00000180137 116 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Mir6338-201ENSMUST00000183389 109 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Mir6372-201ENSMUST00000185114 109 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm37807-201ENSMUST00000194310 190 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm37732-201ENSMUST00000194377 316 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm18982-201ENSMUST00000198118 529 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm34314-201ENSMUST00000203622 367 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm45048-201ENSMUST00000207058 429 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm44600-201ENSMUST00000208540 111 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm45614-201ENSMUST00000209994 721 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm24871-201ENSMUST00000083099 116 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Olfr895-201ENSMUST00000093864 951 ntBASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Clrn3Q8BHH8 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Mir1193-201ENSMUST00000116761 121 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm22141-201ENSMUST00000157403 277 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm25373-201ENSMUST00000158156 115 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm23473-201ENSMUST00000158883 116 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm20698-201ENSMUST00000175657 233 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm24925-201ENSMUST00000178157 107 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm26960-201ENSMUST00000182263 412 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm27964-201ENSMUST00000185195 62 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm29192-201ENSMUST00000190942 377 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm38075-201ENSMUST00000191979 920 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm43070-201ENSMUST00000196938 415 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm43992-201ENSMUST00000204358 197 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm18346-201ENSMUST00000216782 325 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Mir423-201ENSMUST00000083584 109 ntBASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Clrn3Q8BHH8 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm22658-201ENSMUST00000104196 155 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm15159-201ENSMUST00000117062 764 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm649-201ENSMUST00000117284 1054 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm14020-201ENSMUST00000118165 662 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm13085-201ENSMUST00000118356 171 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm14566-201ENSMUST00000118915 321 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm9440-201ENSMUST00000119667 539 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm14736-201ENSMUST00000121470 336 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm12706-201ENSMUST00000121588 698 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm25280-201ENSMUST00000157269 101 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm22339-201ENSMUST00000157718 62 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm17187-201ENSMUST00000164622 410 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm17166-201ENSMUST00000172006 431 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm24757-201ENSMUST00000176987 371 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm6651-201ENSMUST00000189471 271 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 Gm6615-201ENSMUST00000199426 631 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.5□□□□□ -2.01
Clrn3Q8BHH8 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms