Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm28484-201ENSMUST00000190606 312 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm37416-201ENSMUST00000193596 318 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm43855-201ENSMUST00000197462 507 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm44391-201ENSMUST00000198490 93 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm43604-201ENSMUST00000199799 705 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm42666-201ENSMUST00000201954 152 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm6462-201ENSMUST00000081488 304 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm23302-201ENSMUST00000082710 100 ntBASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim56Q80VI1 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm14774-201ENSMUST00000117857 536 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm15844-201ENSMUST00000118016 576 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm12252-201ENSMUST00000119517 219 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm12640-201ENSMUST00000120097 310 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm11506-201ENSMUST00000122414 470 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm25621-201ENSMUST00000157223 114 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm25360-201ENSMUST00000178786 191 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm19503-201ENSMUST00000187109 241 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm38270-201ENSMUST00000192721 407 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm17951-201ENSMUST00000198536 496 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm6303-201ENSMUST00000210123 471 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm45678-201ENSMUST00000210509 295 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm46389-201ENSMUST00000223199 392 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm26446-201ENSMUST00000082455 103 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.95□□□□□ -1.62
Trim56Q80VI1 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Mir690-201ENSMUST00000102110 109 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm24951-201ENSMUST00000102182 109 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Snord66-201ENSMUST00000104051 75 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm15211-201ENSMUST00000118932 528 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 AA413626-201ENSMUST00000121125 494 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm22842-201ENSMUST00000157709 118 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm26036-201ENSMUST00000158149 144 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm23258-201ENSMUST00000158319 106 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm23704-201ENSMUST00000158844 340 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm5263-201ENSMUST00000163646 601 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Mir6899-201ENSMUST00000184798 64 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm42672-201ENSMUST00000197821 352 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm19177-201ENSMUST00000204520 613 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm45005-201ENSMUST00000206640 157 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm46194-201ENSMUST00000218136 320 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.94□□□□□ -1.62
Trim56Q80VI1 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.94□□□□□ -1.62
Trim56Q80VI1 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Trim56Q80VI1 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm23422-201ENSMUST00000102000 107 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm23481-201ENSMUST00000104173 131 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Mir743b-201ENSMUST00000104751 77 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm23120-201ENSMUST00000157654 287 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm24168-201ENSMUST00000178825 107 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Mir6418-201ENSMUST00000185075 115 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm29397-201ENSMUST00000185205 333 ntBASIC4.93□□□□□ -1.62
Trim56Q80VI1 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 124.5 ms