Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm6012-201ENSMUST00000210821 730 ntBASIC2.57□□□□□ -2
Topbp1Q6ZQF0 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.57□□□□□ -2
Topbp1Q6ZQF0 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.57□□□□□ -2
Topbp1Q6ZQF0 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Gm12513-201ENSMUST00000118617 352 ntBASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Gm25888-201ENSMUST00000157778 302 ntBASIC2.56□□□□□ -2
Topbp1Q6ZQF0 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Gm42824-201ENSMUST00000199361 247 ntBASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Gm17872-201ENSMUST00000222550 532 ntBASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.56□□□□□ -2
Topbp1Q6ZQF0 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Topbp1Q6ZQF0 Gm14927-201ENSMUST00000120283 454 ntBASIC2.55□□□□□ -2
Topbp1Q6ZQF0 Gm22158-201ENSMUST00000158411 126 ntBASIC2.55□□□□□ -2
Topbp1Q6ZQF0 Gm43954-201ENSMUST00000204634 544 ntBASIC2.55□□□□□ -2
Topbp1Q6ZQF0 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.55□□□□□ -2
Topbp1Q6ZQF0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm12803-201ENSMUST00000118907 821 ntBASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm13424-201ENSMUST00000122301 354 ntBASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm7209-201ENSMUST00000122339 333 ntBASIC2.54□□□□□ -2
Topbp1Q6ZQF0 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.54□□□□□ -2
Topbp1Q6ZQF0 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm44849-201ENSMUST00000207595 484 ntBASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Gm10088-201ENSMUST00000074116 423 ntBASIC2.54□□□□□ -2
Topbp1Q6ZQF0 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Topbp1Q6ZQF0 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Gm26082-201ENSMUST00000104070 127 ntBASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Trbv22-201ENSMUST00000191697 291 ntBASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Gm18341-201ENSMUST00000197538 622 ntBASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.53□□□□□ -2
Topbp1Q6ZQF0 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.53□□□□□ -2
Topbp1Q6ZQF0 Gm22486-201ENSMUST00000116815 137 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm12926-201ENSMUST00000121158 409 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm29604-201ENSMUST00000187176 163 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm44349-201ENSMUST00000197048 123 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm5670-201ENSMUST00000093546 372 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm25274-201ENSMUST00000104296 135 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm22853-201ENSMUST00000174974 131 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm37037-201ENSMUST00000194475 424 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Gm46312-201ENSMUST00000220961 420 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.52□□□□□ -2.01
Topbp1Q6ZQF0 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Topbp1Q6ZQF0 Gm25728-201ENSMUST00000104525 159 ntBASIC2.51□□□□□ -2.01
Topbp1Q6ZQF0 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC2.51□□□□□ -2.01
Topbp1Q6ZQF0 Gm27894-201ENSMUST00000184177 92 ntBASIC2.51□□□□□ -2.01
Topbp1Q6ZQF0 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.51□□□□□ -2.01
Topbp1Q6ZQF0 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.51□□□□□ -2.01
Topbp1Q6ZQF0 Gm7530-201ENSMUST00000218466 605 ntBASIC2.51□□□□□ -2.01
Topbp1Q6ZQF0 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Topbp1Q6ZQF0 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Gm25170-201ENSMUST00000104191 129 ntBASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Mir878-201ENSMUST00000104680 78 ntBASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Gm14253-201ENSMUST00000122112 639 ntBASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Gm2878-201ENSMUST00000170173 486 ntBASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Gm27668-201ENSMUST00000184188 120 ntBASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Gm29658-201ENSMUST00000185404 230 ntBASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.5□□□□□ -2.01
Topbp1Q6ZQF0 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Topbp1Q6ZQF0 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Topbp1Q6ZQF0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Topbp1Q6ZQF0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.49□□□□□ -2.01
Topbp1Q6ZQF0 Gm22026-201ENSMUST00000122735 281 ntBASIC2.49□□□□□ -2.01
Topbp1Q6ZQF0 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.49□□□□□ -2.01
Topbp1Q6ZQF0 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.49□□□□□ -2.01
Topbp1Q6ZQF0 Gm37684-201ENSMUST00000192779 355 ntBASIC2.49□□□□□ -2.01
Topbp1Q6ZQF0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms