Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm28159-201ENSMUST00000190296 696 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm37404-201ENSMUST00000195726 359 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm43669-201ENSMUST00000198229 436 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm19244-201ENSMUST00000204340 253 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm45814-201ENSMUST00000212646 775 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Snora31-201ENSMUST00000083213 130 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm22718-201ENSMUST00000122701 315 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm8338-201ENSMUST00000163928 363 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Mir6335-201ENSMUST00000184081 98 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm27640-201ENSMUST00000184580 147 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm28755-201ENSMUST00000185773 199 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm28700-201ENSMUST00000187614 579 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm19620-201ENSMUST00000195972 434 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm18325-201ENSMUST00000203228 835 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm44795-201ENSMUST00000205496 319 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm45392-201ENSMUST00000210441 214 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm6012-201ENSMUST00000210821 730 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm45860-201ENSMUST00000212700 334 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm5023-201ENSMUST00000217442 587 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rnf220Q6PDX6 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm12719-201ENSMUST00000118859 241 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm14837-201ENSMUST00000119688 206 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm15223-201ENSMUST00000120989 826 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm14578-201ENSMUST00000122166 391 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm23000-201ENSMUST00000157083 139 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm24191-201ENSMUST00000157977 122 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm25655-201ENSMUST00000158465 290 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm16038-201ENSMUST00000159317 193 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm3027-201ENSMUST00000167579 451 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm25671-201ENSMUST00000178612 105 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm22243-201ENSMUST00000178754 120 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm23307-201ENSMUST00000179167 105 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm25286-201ENSMUST00000179790 105 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm29231-201ENSMUST00000179850 319 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Mir6413-201ENSMUST00000184049 108 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm42647-201ENSMUST00000195939 459 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm42814-201ENSMUST00000199370 460 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm44765-201ENSMUST00000206927 601 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm46327-201ENSMUST00000218240 365 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 AC153961.2-201ENSMUST00000218877 164 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm23626-201ENSMUST00000082458 133 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm25929-201ENSMUST00000082784 107 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Gm37761-201ENSMUST00000194989 2098 ntBASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.94□□□□□ -1.78
Rnf220Q6PDX6 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm22936-201ENSMUST00000103955 126 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm12808-201ENSMUST00000120597 404 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm12578-201ENSMUST00000121244 417 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm23867-201ENSMUST00000122649 274 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm16327-201ENSMUST00000137146 228 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm25383-201ENSMUST00000157810 144 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm22516-201ENSMUST00000158266 124 ntBASIC3.93□□□□□ -1.78
Rnf220Q6PDX6 Gm25397-201ENSMUST00000176951 92 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms