Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm17119-201ENSMUST00000163943 280 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 Mir5129-201ENSMUST00000174938 78 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
Sdc3Q64519 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.14□□□□□ -1.91
Sdc3Q64519 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc3Q64519 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm35931-201ENSMUST00000203931 448 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.14□□□□□ -1.91
Sdc3Q64519 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm46994-201ENSMUST00000221523 219 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm5955-201ENSMUST00000222712 219 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC3.14□□□□□ -1.91
Sdc3Q64519 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.14□□□□□ -1.91
Sdc3Q64519 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Sdc3Q64519 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc3Q64519 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc3Q64519 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm14359-201ENSMUST00000118883 424 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm15113-201ENSMUST00000119280 836 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm12891-201ENSMUST00000119358 240 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm13717-201ENSMUST00000119868 365 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm14982-201ENSMUST00000121102 442 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm25107-201ENSMUST00000122472 129 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm9498-201ENSMUST00000140849 291 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm22532-201ENSMUST00000158822 140 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm3111-201ENSMUST00000167426 490 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm24897-201ENSMUST00000179033 107 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm27163-201ENSMUST00000184767 409 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm28785-201ENSMUST00000187478 379 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm28925-201ENSMUST00000188586 168 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm44990-201ENSMUST00000203922 217 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm35876-201ENSMUST00000205044 459 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc3Q64519 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.13□□□□□ -1.91
Sdc3Q64519 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc3Q64519 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm22507-201ENSMUST00000082773 160 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc3Q64519 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sdc3Q64519 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.13□□□□□ -1.91
Sdc3Q64519 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm14594-201ENSMUST00000118052 537 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm14590-201ENSMUST00000118934 537 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm14240-201ENSMUST00000120353 546 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm26100-201ENSMUST00000157245 127 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm24730-201ENSMUST00000158228 117 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm18396-201ENSMUST00000177095 361 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm25194-201ENSMUST00000177987 79 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm14596-201ENSMUST00000180268 537 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm14595-201ENSMUST00000180335 537 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Mir6338-201ENSMUST00000183389 109 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm29550-201ENSMUST00000185543 285 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm43652-201ENSMUST00000196219 675 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm45173-201ENSMUST00000206819 305 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 Gm45438-201ENSMUST00000210242 564 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.12□□□□□ -1.91
Sdc3Q64519 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.12□□□□□ -1.91
Sdc3Q64519 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms