Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CtcfQ61164 Gm8392-201ENSMUST00000185647 835 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Gm28724-201ENSMUST00000186149 625 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Gm29335-201ENSMUST00000188361 459 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.8□□□□□ -1.8
CtcfQ61164 Gm45327-201ENSMUST00000211612 565 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CtcfQ61164 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CtcfQ61164 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CtcfQ61164 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CtcfQ61164 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CtcfQ61164 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CtcfQ61164 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CtcfQ61164 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CtcfQ61164 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CtcfQ61164 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Mir294-201ENSMUST00000104710 84 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CtcfQ61164 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm22195-201ENSMUST00000116861 108 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm14835-201ENSMUST00000119039 315 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm5762-201ENSMUST00000119204 258 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm12935-201ENSMUST00000119352 246 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm12118-201ENSMUST00000119766 532 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm12640-201ENSMUST00000120097 310 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm15014-201ENSMUST00000120742 258 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm14810-201ENSMUST00000121628 486 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm9498-201ENSMUST00000140849 291 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm25434-201ENSMUST00000158278 167 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm25163-201ENSMUST00000158905 104 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcfQ61164 Mir7050-201ENSMUST00000184636 60 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Mir6914-201ENSMUST00000184999 69 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CtcfQ61164 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm19441-201ENSMUST00000221545 330 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm24622-201ENSMUST00000082619 162 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.79□□□□□ -1.8
CtcfQ61164 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CtcfQ61164 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.79□□□□□ -1.8
CtcfQ61164 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CtcfQ61164 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CtcfQ61164 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CtcfQ61164 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CtcfQ61164 Gm23532-201ENSMUST00000104569 112 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm25563-201ENSMUST00000104603 74 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm14125-201ENSMUST00000113442 680 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm12386-201ENSMUST00000117380 688 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm12722-201ENSMUST00000118507 493 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm14307-201ENSMUST00000118930 291 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm7071-201ENSMUST00000120458 462 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm14297-201ENSMUST00000129110 291 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.78□□□□□ -1.8
CtcfQ61164 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.78□□□□□ -1.8
CtcfQ61164 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.78□□□□□ -1.8
CtcfQ61164 Gm23865-201ENSMUST00000157723 97 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm22516-201ENSMUST00000158266 124 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.78□□□□□ -1.8
CtcfQ61164 Gm23365-201ENSMUST00000175019 125 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm25960-201ENSMUST00000175110 125 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm44453-201ENSMUST00000175161 126 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm25195-201ENSMUST00000177656 126 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CtcfQ61164 Gm37889-201ENSMUST00000194174 251 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm42832-201ENSMUST00000196361 745 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.78□□□□□ -1.8
CtcfQ61164 Gm44465-201ENSMUST00000199536 114 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm45273-201ENSMUST00000211559 281 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm45742-201ENSMUST00000212400 433 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Gm5265-201ENSMUST00000076828 342 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
CtcfQ61164 Snora70-201ENSMUST00000083047 137 ntBASIC3.78□□□□□ -1.8
CtcfQ61164 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CtcfQ61164 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms