Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.94□□□□□ -1.94
Ccdc88bQ4QRL3 Gm23256-201ENSMUST00000102235 110 ntBASIC2.94□□□□□ -1.94
Ccdc88bQ4QRL3 Gm42506-201ENSMUST00000202009 150 ntBASIC2.94□□□□□ -1.94
Ccdc88bQ4QRL3 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.94□□□□□ -1.94
Ccdc88bQ4QRL3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.94□□□□□ -1.94
Ccdc88bQ4QRL3 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Gm11582-201ENSMUST00000121041 236 ntBASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Gm13424-201ENSMUST00000122301 354 ntBASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Gm17161-201ENSMUST00000169187 524 ntBASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Gm6462-201ENSMUST00000081488 304 ntBASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Gm22072-201ENSMUST00000116850 121 ntBASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Gm25279-201ENSMUST00000122608 133 ntBASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Mir344-201ENSMUST00000083634 95 ntBASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ccdc88bQ4QRL3 Gm12876-201ENSMUST00000120975 408 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm24902-201ENSMUST00000158126 123 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm27245-201ENSMUST00000184385 376 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm17946-201ENSMUST00000186856 538 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm28163-201ENSMUST00000187099 325 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm29604-201ENSMUST00000187176 163 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 AC129323.1-201ENSMUST00000216733 470 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Gm17872-201ENSMUST00000222550 532 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 AC129308.2-201ENSMUST00000224588 789 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ccdc88bQ4QRL3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
Ccdc88bQ4QRL3 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.9□□□□□ -1.94
Ccdc88bQ4QRL3 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC2.9□□□□□ -1.94
Ccdc88bQ4QRL3 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.9□□□□□ -1.94
Ccdc88bQ4QRL3 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.9□□□□□ -1.94
Ccdc88bQ4QRL3 Mir365-2-201ENSMUST00000083555 112 ntBASIC2.9□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Ccdc88bQ4QRL3 Gm24984-201ENSMUST00000104454 133 ntBASIC2.9□□□□□ -1.95
Ccdc88bQ4QRL3 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.9□□□□□ -1.95
Ccdc88bQ4QRL3 Gm29597-201ENSMUST00000188035 308 ntBASIC2.9□□□□□ -1.95
Ccdc88bQ4QRL3 Gm37290-201ENSMUST00000195775 339 ntBASIC2.9□□□□□ -1.95
Ccdc88bQ4QRL3 Gm45445-201ENSMUST00000209586 232 ntBASIC2.9□□□□□ -1.95
Ccdc88bQ4QRL3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.9□□□□□ -1.95
Ccdc88bQ4QRL3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Ccdc88bQ4QRL3 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.89□□□□□ -1.95
Ccdc88bQ4QRL3 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Ccdc88bQ4QRL3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.89□□□□□ -1.95
Ccdc88bQ4QRL3 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.89□□□□□ -1.95
Ccdc88bQ4QRL3 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.89□□□□□ -1.95
Ccdc88bQ4QRL3 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 Gm11356-201ENSMUST00000118974 192 ntBASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 Gm12512-201ENSMUST00000119620 217 ntBASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 Mir7052-201ENSMUST00000184821 65 ntBASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 Gm46312-201ENSMUST00000220961 420 ntBASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.88□□□□□ -1.95
Ccdc88bQ4QRL3 Gm649-201ENSMUST00000117284 1054 ntBASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Gm11890-201ENSMUST00000119585 417 ntBASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Gm5929-201ENSMUST00000166883 487 ntBASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Gm26915-201ENSMUST00000183080 748 ntBASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Gm9375-201ENSMUST00000208899 903 ntBASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ccdc88bQ4QRL3 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Gm15896-201ENSMUST00000118045 440 ntBASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Gm16100-201ENSMUST00000120489 231 ntBASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Gm12926-201ENSMUST00000121158 409 ntBASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Gm37778-201ENSMUST00000191732 190 ntBASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.86□□□□□ -1.95
Ccdc88bQ4QRL3 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.85□□□□□ -1.95
Ccdc88bQ4QRL3 Mir7059-201ENSMUST00000184825 59 ntBASIC2.85□□□□□ -1.95
Ccdc88bQ4QRL3 Gm43765-201ENSMUST00000196303 893 ntBASIC2.85□□□□□ -1.95
Ccdc88bQ4QRL3 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.85□□□□□ -1.95
Ccdc88bQ4QRL3 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Ccdc88bQ4QRL3 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Ccdc88bQ4QRL3 Gm24656-201ENSMUST00000177548 132 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms