Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm25727-201ENSMUST00000104522 131 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm12053-201ENSMUST00000119022 252 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm14282-201ENSMUST00000119484 240 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm13687-201ENSMUST00000119857 282 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm23206-201ENSMUST00000122720 184 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm2389-201ENSMUST00000160487 189 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm15900-201ENSMUST00000161584 342 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm21978-201ENSMUST00000179696 377 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm28629-201ENSMUST00000187309 263 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm18505-201ENSMUST00000187360 790 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm43083-201ENSMUST00000199594 476 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm44161-201ENSMUST00000203532 253 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm44041-201ENSMUST00000203678 396 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm5322-201ENSMUST00000206142 699 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm22229-201ENSMUST00000082987 108 ntBASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm23063-201ENSMUST00000102350 93 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm16431-201ENSMUST00000117454 431 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm13082-201ENSMUST00000118877 561 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm14570-201ENSMUST00000119444 391 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm11862-201ENSMUST00000119678 659 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm6591-201ENSMUST00000121063 434 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm6079-201ENSMUST00000121356 404 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm11645-201ENSMUST00000121589 649 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm14977-201ENSMUST00000121626 812 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm23538-201ENSMUST00000157535 101 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm23865-201ENSMUST00000157723 97 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm23257-201ENSMUST00000158322 132 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm16038-201ENSMUST00000159317 193 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm20415-201ENSMUST00000172877 423 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm20656-201ENSMUST00000176925 518 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm6625-201ENSMUST00000177870 272 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Spin2g-201ENSMUST00000178425 687 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm22951-201ENSMUST00000179471 107 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm23144-201ENSMUST00000180226 107 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm8649-201ENSMUST00000181799 233 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm28098-201ENSMUST00000191361 699 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm28408-201ENSMUST00000191557 463 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm36954-201ENSMUST00000195362 363 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm45146-201ENSMUST00000207108 221 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm17990-201ENSMUST00000211728 553 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm45814-201ENSMUST00000212646 775 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm18488-201ENSMUST00000215082 364 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.6□□□□□ -1.83
Col28a1Q2UY11 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.6□□□□□ -1.83
Col28a1Q2UY11 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm25764-201ENSMUST00000104092 134 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm14517-201ENSMUST00000119040 337 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm14736-201ENSMUST00000121470 336 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm14768-201ENSMUST00000122126 678 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm25982-201ENSMUST00000157920 101 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm24730-201ENSMUST00000158228 117 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm7241-201ENSMUST00000159853 357 ntBASIC3.59□□□□□ -1.83
Col28a1Q2UY11 Gm23365-201ENSMUST00000175019 125 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms