Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm37296-201ENSMUST00000192728 2922 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm24276-201ENSMUST00000102181 110 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm23320-201ENSMUST00000104462 127 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm22373-201ENSMUST00000104584 89 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm14878-201ENSMUST00000118167 293 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm24916-201ENSMUST00000157287 79 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm25220-201ENSMUST00000157546 95 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm23641-201ENSMUST00000157857 101 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm23196-201ENSMUST00000158806 107 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm5967-201ENSMUST00000172723 494 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm22650-201ENSMUST00000175138 105 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm44319-201ENSMUST00000196974 93 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm22576-201ENSMUST00000083733 104 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col9a1Q05722 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Col9a1Q05722 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col9a1Q05722 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.34□□□□□ -1.55
Col9a1Q05722 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.34□□□□□ -1.56
Col9a1Q05722 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col9a1Q05722 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col9a1Q05722 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col9a1Q05722 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col9a1Q05722 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col9a1Q05722 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col9a1Q05722 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Mir1298-201ENSMUST00000116681 98 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm11774-201ENSMUST00000118601 293 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm13922-201ENSMUST00000119505 156 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm13232-201ENSMUST00000121816 632 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm12238-201ENSMUST00000127764 124 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm25961-201ENSMUST00000157174 135 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm24720-201ENSMUST00000157518 166 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm23865-201ENSMUST00000157723 97 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Mir6338-201ENSMUST00000183389 109 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm44337-201ENSMUST00000196553 114 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Trav5-2-201ENSMUST00000199855 280 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm45492-201ENSMUST00000211611 288 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm7422-201ENSMUST00000220115 640 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
Col9a1Q05722 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col9a1Q05722 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.33□□□□□ -1.56
Col9a1Q05722 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col9a1Q05722 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col9a1Q05722 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.32□□□□□ -1.56
Col9a1Q05722 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col9a1Q05722 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Col9a1Q05722 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col9a1Q05722 Mir450b-201ENSMUST00000102095 82 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm22148-201ENSMUST00000104445 107 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm13432-201ENSMUST00000118861 241 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm13338-201ENSMUST00000120235 361 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm25572-201ENSMUST00000157527 172 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm24552-201ENSMUST00000158646 103 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm29489-201ENSMUST00000188934 324 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm29428-201ENSMUST00000190086 409 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Gm23464-201ENSMUST00000083145 147 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.32□□□□□ -1.56
Col9a1Q05722 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col9a1Q05722 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col9a1Q05722 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.32□□□□□ -1.56
Col9a1Q05722 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col9a1Q05722 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms