Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.89□□□□□ -1.63
Col6a1Q04857 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm42579-201ENSMUST00000200512 734 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm44092-201ENSMUST00000204470 258 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm44157-201ENSMUST00000204720 410 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm44583-201ENSMUST00000207478 281 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm44811-201ENSMUST00000209120 228 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm6303-201ENSMUST00000210123 471 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a1Q04857 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a1Q04857 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm24045-201ENSMUST00000083113 98 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Col6a1Q04857 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a1Q04857 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a1Q04857 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a1Q04857 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a1Q04857 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.89□□□□□ -1.63
Col6a1Q04857 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a1Q04857 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a1Q04857 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 AC133079.1-201ENSMUST00000220943 1881 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a1Q04857 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm15745-201ENSMUST00000119807 115 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm14500-201ENSMUST00000121647 113 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm12785-201ENSMUST00000122052 172 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm10444-201ENSMUST00000126708 148 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm23901-201ENSMUST00000157570 107 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm23782-201ENSMUST00000157939 120 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm8069-201ENSMUST00000197887 154 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm42665-201ENSMUST00000202100 586 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm44513-201ENSMUST00000206811 439 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.88□□□□□ -1.63
Col6a1Q04857 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm25821-201ENSMUST00000093657 133 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Col6a1Q04857 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.88□□□□□ -1.63
Col6a1Q04857 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a1Q04857 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a1Q04857 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm6079-201ENSMUST00000121356 404 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm14916-201ENSMUST00000121904 204 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm25572-201ENSMUST00000157527 172 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm26001-201ENSMUST00000157989 103 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm24503-201ENSMUST00000158454 135 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm25956-201ENSMUST00000175115 217 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Mir3058-201ENSMUST00000175126 91 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm27410-201ENSMUST00000183851 115 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm18384-201ENSMUST00000195974 808 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm35931-201ENSMUST00000203931 448 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm18320-201ENSMUST00000211304 595 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.87□□□□□ -1.63
Col6a1Q04857 Gm4036-201ENSMUST00000220842 626 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.87□□□□□ -1.63
Col6a1Q04857 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a1Q04857 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a1Q04857 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a1Q04857 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a1Q04857 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms