Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Nkx3-1P97436 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Nkx3-1P97436 Gm24611-201ENSMUST00000083272 107 ntBASIC2.09□□□□□ -2.07
Nkx3-1P97436 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.09□□□□□ -2.08
Nkx3-1P97436 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.09□□□□□ -2.08
Nkx3-1P97436 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nkx3-1P97436 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm24280-201ENSMUST00000104237 134 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm14579-201ENSMUST00000117068 283 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm2288-201ENSMUST00000118560 638 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm15116-201ENSMUST00000122248 663 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm12443-201ENSMUST00000122308 323 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm23886-201ENSMUST00000122684 313 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm23600-201ENSMUST00000157260 71 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm24436-201ENSMUST00000157889 302 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm24212-201ENSMUST00000158258 132 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm17072-201ENSMUST00000166673 658 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm25412-201ENSMUST00000180258 107 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Mir6363-201ENSMUST00000184880 114 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm19641-201ENSMUST00000188432 417 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm9696-202ENSMUST00000191541 830 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm17935-201ENSMUST00000196649 772 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm25820-202ENSMUST00000197479 128 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm2676-201ENSMUST00000207279 606 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm18645-202ENSMUST00000212222 760 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Nkx3-1P97436 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.08□□□□□ -2.08
Nkx3-1P97436 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Nkx3-1P97436 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm25130-201ENSMUST00000082650 156 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nkx3-1P97436 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Nkx3-1P97436 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.08□□□□□ -2.08
Nkx3-1P97436 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm12956-201ENSMUST00000122184 414 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm15274-201ENSMUST00000131442 291 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm21979-201ENSMUST00000139887 291 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm15259-201ENSMUST00000151262 291 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm23223-201ENSMUST00000158119 127 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm23053-201ENSMUST00000175136 96 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Mir8118-201ENSMUST00000183962 129 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm20811-201ENSMUST00000190500 553 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm38214-201ENSMUST00000192581 988 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm38311-201ENSMUST00000192945 165 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm43669-201ENSMUST00000198229 436 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm17893-201ENSMUST00000203017 770 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Nkx3-1P97436 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.07□□□□□ -2.08
Nkx3-1P97436 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Snord104-201ENSMUST00000083192 70 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm23096-201ENSMUST00000083447 107 ntBASIC2.07□□□□□ -2.08
Nkx3-1P97436 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Nkx3-1P97436 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.07□□□□□ -2.08
Nkx3-1P97436 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Mir344e-201ENSMUST00000104677 66 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm14943-201ENSMUST00000118056 546 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm14736-201ENSMUST00000121470 336 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm16359-201ENSMUST00000124511 289 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm23167-201ENSMUST00000157155 103 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Nkx3-1P97436 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm22264-201ENSMUST00000178200 107 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm3852-201ENSMUST00000182781 264 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm44088-201ENSMUST00000204595 237 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 Gm44555-201ENSMUST00000209008 148 ntBASIC2.06□□□□□ -2.08
Nkx3-1P97436 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms