Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.32□□□□□ -1.72
SgcbP82349 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.32□□□□□ -1.72
SgcbP82349 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SgcbP82349 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SgcbP82349 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SgcbP82349 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.32□□□□□ -1.72
SgcbP82349 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.32□□□□□ -1.72
SgcbP82349 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SgcbP82349 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.32□□□□□ -1.72
SgcbP82349 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SgcbP82349 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SgcbP82349 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.32□□□□□ -1.72
SgcbP82349 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SgcbP82349 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.31□□□□□ -1.72
SgcbP82349 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.31□□□□□ -1.72
SgcbP82349 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SgcbP82349 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SgcbP82349 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SgcbP82349 Gm24160-201ENSMUST00000104594 126 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm15058-201ENSMUST00000117689 458 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm12417-201ENSMUST00000119153 403 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm14119-201ENSMUST00000119511 235 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm25103-201ENSMUST00000122671 318 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm25390-201ENSMUST00000157341 103 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm24005-201ENSMUST00000158459 296 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm24001-201ENSMUST00000158463 85 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm25450-201ENSMUST00000179144 107 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 Mir3535-201ENSMUST00000197651 147 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.31□□□□□ -1.72
SgcbP82349 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.31□□□□□ -1.72
SgcbP82349 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SgcbP82349 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.31□□□□□ -1.72
SgcbP82349 Gm45273-201ENSMUST00000211559 281 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.31□□□□□ -1.72
SgcbP82349 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.31□□□□□ -1.72
SgcbP82349 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.31□□□□□ -1.72
SgcbP82349 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm26457-201ENSMUST00000082678 78 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SgcbP82349 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 Neat1-201ENSMUST00000173672 20771 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SgcbP82349 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.31□□□□□ -1.72
SgcbP82349 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SgcbP82349 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
SgcbP82349 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
SgcbP82349 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SgcbP82349 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
SgcbP82349 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SgcbP82349 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SgcbP82349 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SgcbP82349 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SgcbP82349 Mir541-201ENSMUST00000102097 90 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SgcbP82349 Gm22272-201ENSMUST00000104039 134 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm15002-201ENSMUST00000118406 452 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm15120-201ENSMUST00000120602 301 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm14846-201ENSMUST00000121868 216 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm23184-201ENSMUST00000122594 131 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm16060-201ENSMUST00000153140 478 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm22145-201ENSMUST00000157396 148 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm23513-201ENSMUST00000158181 133 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm23546-201ENSMUST00000158211 137 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm22611-201ENSMUST00000158288 150 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm3370-201ENSMUST00000171785 500 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm24264-201ENSMUST00000179835 94 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm27585-201ENSMUST00000183717 199 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm27545-201ENSMUST00000184755 202 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm37089-201ENSMUST00000195616 129 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.3□□□□□ -1.72
SgcbP82349 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.3□□□□□ -1.72
SgcbP82349 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.3□□□□□ -1.72
SgcbP82349 Gm18011-201ENSMUST00000203717 565 ntBASIC4.3□□□□□ -1.72
SgcbP82349 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.3□□□□□ -1.72
SgcbP82349 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.3□□□□□ -1.72
SgcbP82349 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SgcbP82349 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms