Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC153864.2-201ENSMUST00000220424 292 ntBASIC5.23□□□□□ -1.57
Rfx1P48377 AC130821.1-201ENSMUST00000221997 293 ntBASIC5.23□□□□□ -1.57
Rfx1P48377 AC140477.1-201ENSMUST00000222354 246 ntBASIC5.23□□□□□ -1.57
Rfx1P48377 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rfx1P48377 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Rfx1P48377 Gm19428-201ENSMUST00000220512 1995 ntBASIC5.23□□□□□ -1.57
Rfx1P48377 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Rfx1P48377 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC5.23□□□□□ -1.57
Rfx1P48377 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC5.23□□□□□ -1.57
Rfx1P48377 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Rfx1P48377 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rfx1P48377 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Rfx1P48377 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rfx1P48377 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rfx1P48377 Gm15560-201ENSMUST00000117107 643 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Gm15297-201ENSMUST00000117795 290 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Gm12087-201ENSMUST00000121878 258 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.22□□□□□ -1.57
Rfx1P48377 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.22□□□□□ -1.57
Rfx1P48377 Gm16060-201ENSMUST00000153140 478 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.22□□□□□ -1.57
Rfx1P48377 Gm25362-201ENSMUST00000158854 105 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rfx1P48377 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Rfx1P48377 Gm8242-202ENSMUST00000193056 475 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Gm19366-201ENSMUST00000206996 156 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rfx1P48377 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Rfx1P48377 Gm15088-201ENSMUST00000117973 1508 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 Gm15098-201ENSMUST00000119036 1508 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.22□□□□□ -1.57
Rfx1P48377 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Rfx1P48377 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
Rfx1P48377 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rfx1P48377 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rfx1P48377 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rfx1P48377 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Rfx1P48377 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rfx1P48377 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rfx1P48377 Gm24855-201ENSMUST00000104848 97 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm13876-201ENSMUST00000118451 261 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm14541-201ENSMUST00000118985 157 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm13873-201ENSMUST00000119208 427 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm15168-201ENSMUST00000121057 316 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm7840-201ENSMUST00000122086 533 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Rfx1P48377 Gm23557-201ENSMUST00000157820 138 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm22098-201ENSMUST00000157930 85 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm25718-201ENSMUST00000158632 118 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm24552-201ENSMUST00000158646 103 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm24085-201ENSMUST00000175172 116 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm24264-201ENSMUST00000179835 94 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm42832-201ENSMUST00000196361 745 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm45815-201ENSMUST00000220241 146 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Gm7117-201ENSMUST00000071515 387 ntBASIC5.21□□□□□ -1.58
Rfx1P48377 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rfx1P48377 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Rfx1P48377 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rfx1P48377 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Gm44049-201ENSMUST00000204905 2984 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Rfx1P48377 Gm12238-201ENSMUST00000127764 124 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC5.2□□□□□ -1.58
Rfx1P48377 Gm26318-201ENSMUST00000176507 96 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Gm26426-201ENSMUST00000177866 123 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Gm26060-201ENSMUST00000180094 123 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.2□□□□□ -1.58
Rfx1P48377 Mir195b-201ENSMUST00000184814 97 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Gm29429-201ENSMUST00000187071 121 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Gm37603-201ENSMUST00000192368 219 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.2□□□□□ -1.58
Rfx1P48377 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Gm17766-201ENSMUST00000209223 442 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.2□□□□□ -1.58
Rfx1P48377 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.2□□□□□ -1.58
Rfx1P48377 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 AC154276.2-201ENSMUST00000227707 309 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Mir31-201ENSMUST00000083474 106 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Mir21a-201ENSMUST00000083521 92 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rfx1P48377 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Rfx1P48377 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Rfx1P48377 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rfx1P48377 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rfx1P48377 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Rfx1P48377 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Rfx1P48377 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.2□□□□□ -1.58
Rfx1P48377 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Rfx1P48377 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.19□□□□□ -1.58
Rfx1P48377 Gm25967-201ENSMUST00000157168 147 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms