Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.36□□□□□ -1.71
Usp4P35123 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.36□□□□□ -1.71
Usp4P35123 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.36□□□□□ -1.71
Usp4P35123 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm23928-201ENSMUST00000082469 145 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm26121-201ENSMUST00000083364 162 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm25755-201ENSMUST00000083396 107 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Usp4P35123 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Usp4P35123 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Usp4P35123 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Usp4P35123 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Usp4P35123 Gm42755-201ENSMUST00000198533 1493 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Usp4P35123 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.36□□□□□ -1.71
Usp4P35123 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.36□□□□□ -1.71
Usp4P35123 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.35□□□□□ -1.71
Usp4P35123 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Usp4P35123 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Usp4P35123 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Usp4P35123 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Usp4P35123 Gm23273-201ENSMUST00000104058 135 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm14570-201ENSMUST00000119444 391 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.35□□□□□ -1.71
Usp4P35123 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Usp4P35123 Gm26362-201ENSMUST00000158865 315 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm5263-201ENSMUST00000163646 601 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Mir5624-201ENSMUST00000176635 61 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.35□□□□□ -1.71
Usp4P35123 Gm28623-201ENSMUST00000187219 192 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm19202-201ENSMUST00000198096 808 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm42453-201ENSMUST00000200477 409 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm8132-201ENSMUST00000204938 640 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.35□□□□□ -1.71
Usp4P35123 Gm44650-201ENSMUST00000206929 194 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm46194-201ENSMUST00000218136 320 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm9616-201ENSMUST00000221154 781 ntBASIC4.35□□□□□ -1.71
Usp4P35123 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.35□□□□□ -1.71
Usp4P35123 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm24045-201ENSMUST00000083113 98 ntBASIC4.35□□□□□ -1.71
Usp4P35123 Gm26164-201ENSMUST00000083793 104 ntBASIC4.35□□□□□ -1.71
Usp4P35123 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Usp4P35123 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Usp4P35123 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Usp4P35123 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Usp4P35123 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Usp4P35123 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Usp4P35123 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Usp4P35123 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Usp4P35123 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Usp4P35123 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Usp4P35123 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Usp4P35123 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Usp4P35123 Gm23577-201ENSMUST00000103950 110 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm25316-201ENSMUST00000116826 118 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm15148-201ENSMUST00000117602 156 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm13478-201ENSMUST00000118312 413 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm12118-201ENSMUST00000119766 532 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Usp4P35123 Gm12876-201ENSMUST00000120975 408 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm14287-201ENSMUST00000121060 117 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm22843-201ENSMUST00000157710 134 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm22211-201ENSMUST00000158097 156 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm17109-201ENSMUST00000163985 358 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm3191-201ENSMUST00000167139 346 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.34□□□□□ -1.71
Usp4P35123 Gm22621-201ENSMUST00000179678 74 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.34□□□□□ -1.71
Usp4P35123 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Usp4P35123 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.34□□□□□ -1.71
Usp4P35123 Gm43604-201ENSMUST00000199799 705 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm44059-201ENSMUST00000204048 351 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Usp4P35123 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.34□□□□□ -1.71
Usp4P35123 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.34□□□□□ -1.71
Usp4P35123 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.34□□□□□ -1.71
Usp4P35123 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Usp4P35123 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Usp4P35123 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Usp4P35123 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.34□□□□□ -1.71
Usp4P35123 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
Usp4P35123 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Usp4P35123 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Usp4P35123 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Usp4P35123 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.33□□□□□ -1.72
Usp4P35123 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Usp4P35123 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Usp4P35123 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
Usp4P35123 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Usp4P35123 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.33□□□□□ -1.72
Usp4P35123 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Usp4P35123 Gm23226-201ENSMUST00000116927 103 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms