Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm3690-201ENSMUST00000211341 262 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.69□□□□□ -1.98
Col2a1P28481 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col2a1P28481 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col2a1P28481 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col2a1P28481 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col2a1P28481 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col2a1P28481 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Col2a1P28481 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.69□□□□□ -1.98
Col2a1P28481 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col2a1P28481 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col2a1P28481 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col2a1P28481 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col2a1P28481 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col2a1P28481 Gm14469-201ENSMUST00000118363 202 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm13406-201ENSMUST00000121991 256 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.68□□□□□ -1.98
Col2a1P28481 Gm7846-201ENSMUST00000145844 274 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm24080-201ENSMUST00000175178 232 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col2a1P28481 Gm21809-201ENSMUST00000178495 468 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Mir6238-201ENSMUST00000184140 129 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm27942-201ENSMUST00000184669 101 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm28384-201ENSMUST00000189079 463 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Mir497-201ENSMUST00000200557 84 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col2a1P28481 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.68□□□□□ -1.98
Col2a1P28481 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col2a1P28481 Gm25130-201ENSMUST00000082650 156 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col2a1P28481 Mir465-201ENSMUST00000093563 74 ntBASIC2.68□□□□□ -1.98
Col2a1P28481 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col2a1P28481 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col2a1P28481 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col2a1P28481 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.67□□□□□ -1.98
Col2a1P28481 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Col2a1P28481 Mir344e-201ENSMUST00000104677 66 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm3940-201ENSMUST00000105087 432 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm12636-201ENSMUST00000117395 624 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm13228-201ENSMUST00000118937 634 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm13419-201ENSMUST00000121711 271 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm12956-201ENSMUST00000122184 414 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm15116-201ENSMUST00000122248 663 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm24241-201ENSMUST00000157787 145 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm23034-201ENSMUST00000158001 147 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm22947-201ENSMUST00000158559 91 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm5263-201ENSMUST00000163646 601 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col2a1P28481 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col2a1P28481 Gm27964-201ENSMUST00000185195 62 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.67□□□□□ -1.98
Col2a1P28481 Gm3496-201ENSMUST00000188283 745 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm28956-201ENSMUST00000189047 427 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC2.67□□□□□ -1.98
Col2a1P28481 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.67□□□□□ -1.98
Col2a1P28481 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm44181-201ENSMUST00000203106 483 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm44817-201ENSMUST00000205416 453 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.67□□□□□ -1.98
Col2a1P28481 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 AC151907.1-201ENSMUST00000228812 412 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm9818-201ENSMUST00000050900 255 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col2a1P28481 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col2a1P28481 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col2a1P28481 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.67□□□□□ -1.98
Col2a1P28481 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col2a1P28481 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col2a1P28481 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col2a1P28481 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col2a1P28481 Gm15110-201ENSMUST00000117545 881 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col2a1P28481 Gm23111-201ENSMUST00000122652 105 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm24885-201ENSMUST00000158783 270 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm17377-201ENSMUST00000165184 207 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm5929-201ENSMUST00000166883 487 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col2a1P28481 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col2a1P28481 Gm22108-201ENSMUST00000177961 106 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm24798-201ENSMUST00000179334 106 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.66□□□□□ -1.98
Col2a1P28481 Gm38281-201ENSMUST00000192301 315 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms