Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mir208a-201ENSMUST00000083498 83 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Mir27a-201ENSMUST00000083510 87 ntBASIC2.34□□□□□ -2.03
Sdc1P18828 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Sdc1P18828 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Sdc1P18828 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
Sdc1P18828 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Sdc1P18828 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.34□□□□□ -2.04
Sdc1P18828 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Sdc1P18828 Igkv11-106-201ENSMUST00000103331 346 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm14602-201ENSMUST00000118625 340 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm14815-201ENSMUST00000120060 488 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm14841-201ENSMUST00000121067 758 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Sdc1P18828 Gm22794-201ENSMUST00000157228 306 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm17065-201ENSMUST00000165245 239 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Mir5112-201ENSMUST00000174897 60 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm26189-201ENSMUST00000179879 107 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Mir8106-201ENSMUST00000184520 139 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm29600-201ENSMUST00000188687 377 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm43355-201ENSMUST00000196541 346 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm44391-201ENSMUST00000198490 93 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.33□□□□□ -2.04
Sdc1P18828 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Sdc1P18828 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.33□□□□□ -2.04
Sdc1P18828 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.33□□□□□ -2.04
Sdc1P18828 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.33□□□□□ -2.04
Sdc1P18828 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.33□□□□□ -2.04
Sdc1P18828 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Gm2710-201ENSMUST00000073196 603 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Sdc1P18828 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.33□□□□□ -2.04
Sdc1P18828 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Sdc1P18828 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Sdc1P18828 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Sdc1P18828 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
Sdc1P18828 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc1P18828 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc1P18828 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc1P18828 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Sdc1P18828 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc1P18828 Mir542-201ENSMUST00000102186 85 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm13806-201ENSMUST00000117822 325 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm14594-201ENSMUST00000118052 537 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Defa-ps9-201ENSMUST00000118264 276 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm14590-201ENSMUST00000118934 537 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm15223-201ENSMUST00000120989 826 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm14506-201ENSMUST00000121165 536 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm12617-201ENSMUST00000121268 381 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm26276-201ENSMUST00000157099 109 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm24475-201ENSMUST00000157435 143 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm23380-201ENSMUST00000158448 103 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Mir3066-201ENSMUST00000175296 83 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm14596-201ENSMUST00000180268 537 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm14595-201ENSMUST00000180335 537 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm7870-201ENSMUST00000184467 616 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc1P18828 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc1P18828 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm19774-201ENSMUST00000190667 114 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm38213-201ENSMUST00000193203 173 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm38053-201ENSMUST00000193938 160 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm44060-201ENSMUST00000204440 410 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.32□□□□□ -2.04
Sdc1P18828 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Sdc1P18828 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Sdc1P18828 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Sdc1P18828 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Sdc1P18828 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Sdc1P18828 Gm23650-201ENSMUST00000083355 70 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Sdc1P18828 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.32□□□□□ -2.04
Sdc1P18828 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Sdc1P18828 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.31□□□□□ -2.04
Sdc1P18828 Gm26473-201ENSMUST00000116763 127 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm14579-201ENSMUST00000117068 283 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm14622-201ENSMUST00000117117 468 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm15113-201ENSMUST00000119280 836 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.31□□□□□ -2.04
Sdc1P18828 Gm26275-201ENSMUST00000157101 268 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm25621-201ENSMUST00000157223 114 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm26100-201ENSMUST00000157245 127 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm22563-201ENSMUST00000157333 269 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm23325-201ENSMUST00000157422 129 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm22651-201ENSMUST00000157872 94 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm20673-201ENSMUST00000177167 430 ntBASIC2.31□□□□□ -2.04
Sdc1P18828 Gm19898-201ENSMUST00000177490 251 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms