Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col5a1O88207 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Col5a1O88207 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col5a1O88207 BC051076-202ENSMUST00000199477 2868 ntBASIC2.13□□□□□ -2.07
Col5a1O88207 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm2348-201ENSMUST00000108782 300 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm15399-201ENSMUST00000118055 724 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm12607-201ENSMUST00000120724 493 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm22392-201ENSMUST00000177971 107 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm24417-201ENSMUST00000178123 79 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm24653-201ENSMUST00000178541 79 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm25934-201ENSMUST00000178642 79 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm38213-201ENSMUST00000193203 173 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm43841-201ENSMUST00000199491 586 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm42857-201ENSMUST00000200823 339 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Olfr790-204ENSMUST00000218901 1070 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.12□□□□□ -2.07
Col5a1O88207 AC116589.9-201ENSMUST00000221462 908 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col5a1O88207 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col5a1O88207 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Col5a1O88207 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col5a1O88207 Mir706-201ENSMUST00000102262 84 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm15159-201ENSMUST00000117062 764 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm12448-201ENSMUST00000118852 655 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm23223-201ENSMUST00000158119 127 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm24771-201ENSMUST00000158508 137 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm28437-201ENSMUST00000190277 783 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm30341-201ENSMUST00000194363 289 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm18340-201ENSMUST00000196342 609 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm9373-201ENSMUST00000208724 599 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC2.12□□□□□ -2.07
Col5a1O88207 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Col5a1O88207 Gm10794-201ENSMUST00000099624 207 ntBASIC2.12□□□□□ -2.07
Col5a1O88207 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Col5a1O88207 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Col5a1O88207 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col5a1O88207 Gm26377-201ENSMUST00000102184 108 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm22019-201ENSMUST00000104359 96 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm15125-201ENSMUST00000116185 800 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm15110-201ENSMUST00000117545 881 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm14541-201ENSMUST00000118985 157 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm6444-201ENSMUST00000119611 458 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col5a1O88207 Gm37845-201ENSMUST00000194977 355 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Col5a1O88207 Gm18861-201ENSMUST00000202509 1186 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm45034-201ENSMUST00000206831 482 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm19709-201ENSMUST00000215403 482 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.11□□□□□ -2.07
Col5a1O88207 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col5a1O88207 Gm30738-201ENSMUST00000221346 502 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Col5a1O88207 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Col5a1O88207 Mir222-201ENSMUST00000083537 79 ntBASIC2.11□□□□□ -2.07
Col5a1O88207 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Col5a1O88207 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col5a1O88207 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col5a1O88207 Gm25313-201ENSMUST00000101817 116 ntBASIC2.1□□□□□ -2.07
Col5a1O88207 Gm14879-201ENSMUST00000117308 507 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms