Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 Gm13356-201ENSMUST00000121678 335 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm22956-201ENSMUST00000122520 80 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.4□□□□□ -1.87
Cldn4O35054 Gm22722-201ENSMUST00000157467 132 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm22833-201ENSMUST00000158292 132 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Mir6341-201ENSMUST00000183490 121 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm27783-201ENSMUST00000183534 105 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm28785-201ENSMUST00000187478 379 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.4□□□□□ -1.87
Cldn4O35054 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.4□□□□□ -1.87
Cldn4O35054 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cldn4O35054 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cldn4O35054 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm20304-201ENSMUST00000218168 444 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Gm18113-201ENSMUST00000220630 303 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cldn4O35054 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cldn4O35054 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Cldn4O35054 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.4□□□□□ -1.87
Cldn4O35054 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm25848-201ENSMUST00000116790 144 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm13761-201ENSMUST00000117238 807 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm14669-201ENSMUST00000118841 250 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm7916-201ENSMUST00000120325 456 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm7308-201ENSMUST00000121087 447 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm12095-201ENSMUST00000121962 816 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm8840-201ENSMUST00000122454 386 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm23538-201ENSMUST00000157535 101 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm25490-201ENSMUST00000158734 130 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Snord92-201ENSMUST00000175548 85 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm24306-201ENSMUST00000180229 79 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm26988-201ENSMUST00000183296 945 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm27477-201ENSMUST00000184649 143 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.39□□□□□ -1.87
Cldn4O35054 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cldn4O35054 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm37431-201ENSMUST00000195102 111 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm38109-201ENSMUST00000195386 181 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm37119-201ENSMUST00000195691 389 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm43578-201ENSMUST00000201250 459 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm43954-201ENSMUST00000204634 544 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm45049-201ENSMUST00000207586 591 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm45513-201ENSMUST00000210228 376 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm46194-201ENSMUST00000218136 320 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm9762-201ENSMUST00000036976 444 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm24610-201ENSMUST00000083270 109 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm10212-201ENSMUST00000087884 324 ntBASIC3.39□□□□□ -1.87
Cldn4O35054 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
Cldn4O35054 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cldn4O35054 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Cldn4O35054 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cldn4O35054 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cldn4O35054 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cldn4O35054 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Cldn4O35054 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cldn4O35054 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cldn4O35054 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cldn4O35054 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cldn4O35054 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Cldn4O35054 Gm24119-201ENSMUST00000103979 246 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm25308-201ENSMUST00000104171 158 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm23747-201ENSMUST00000104228 131 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.38□□□□□ -1.87
Cldn4O35054 Gm25539-201ENSMUST00000116886 122 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm14292-201ENSMUST00000118761 456 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm15190-201ENSMUST00000120855 276 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.38□□□□□ -1.87
Cldn4O35054 Gm16274-201ENSMUST00000139251 592 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm14389-201ENSMUST00000140453 241 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.38□□□□□ -1.87
Cldn4O35054 Gm25967-201ENSMUST00000157168 147 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm25559-201ENSMUST00000157182 74 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm23671-201ENSMUST00000157472 103 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm23592-201ENSMUST00000157859 117 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Gm22765-201ENSMUST00000158371 128 ntBASIC3.38□□□□□ -1.87
Cldn4O35054 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms