Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm15244-201ENSMUST00000121122 130 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm24481-201ENSMUST00000157210 102 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm22433-201ENSMUST00000158550 142 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm24664-201ENSMUST00000158939 100 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm17187-201ENSMUST00000164622 410 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm22348-201ENSMUST00000178674 79 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm27688-201ENSMUST00000183634 91 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Mir8106-201ENSMUST00000184520 139 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm37670-201ENSMUST00000193622 229 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm37601-201ENSMUST00000194922 394 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm5215-201ENSMUST00000054380 405 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm10092-201ENSMUST00000077110 180 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm25818-201ENSMUST00000083282 164 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm22973-201ENSMUST00000083298 191 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Mir20a-201ENSMUST00000083508 107 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc9bA3KGF9 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm14304-201ENSMUST00000117272 446 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm15553-201ENSMUST00000118757 430 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm13424-201ENSMUST00000122301 354 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm25290-201ENSMUST00000122796 144 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm12854-201ENSMUST00000128518 297 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm24750-201ENSMUST00000157843 104 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm26085-201ENSMUST00000157900 116 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm24188-201ENSMUST00000157980 108 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm25907-201ENSMUST00000158486 125 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm28118-201ENSMUST00000185957 294 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm29014-201ENSMUST00000191422 326 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm42647-201ENSMUST00000195939 459 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm4321-201ENSMUST00000200520 442 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm7665-201ENSMUST00000076710 297 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Snord47-201ENSMUST00000083034 77 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm25260-201ENSMUST00000083053 134 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc9bA3KGF9 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm23836-201ENSMUST00000104434 129 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm22493-201ENSMUST00000104494 132 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Mir881-201ENSMUST00000104844 78 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm8145-201ENSMUST00000118220 745 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm15029-201ENSMUST00000119742 199 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm14877-201ENSMUST00000119803 478 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm11398-201ENSMUST00000120330 320 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm24629-201ENSMUST00000122762 89 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm25224-201ENSMUST00000158195 68 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm25865-201ENSMUST00000158247 104 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Mir6335-201ENSMUST00000184081 98 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm36946-201ENSMUST00000192706 435 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm43309-201ENSMUST00000200837 458 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc9bA3KGF9 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms