Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm13147-202ENSMUST00000177526 1173 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm28637-201ENSMUST00000179424 345 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Mir7016-201ENSMUST00000184308 72 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm3724-201ENSMUST00000197957 349 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm44274-201ENSMUST00000203417 256 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm650-201ENSMUST00000144428 1551 ntBASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trav8-1A0A075B641 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.18
Trav8-1A0A075B641 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Mir3096-201ENSMUST00000116685 71 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm15037-201ENSMUST00000120358 259 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm1989-201ENSMUST00000126244 636 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm22037-201ENSMUST00000157280 296 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm25488-201ENSMUST00000158728 118 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm23342-201ENSMUST00000158958 115 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm27979-201ENSMUST00000185126 56 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm43541-201ENSMUST00000197208 581 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 AC140451.2-202ENSMUST00000226156 574 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
Trav8-1A0A075B641 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm23942-201ENSMUST00000101956 107 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm14020-201ENSMUST00000118165 662 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm24691-201ENSMUST00000157762 140 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm24922-201ENSMUST00000158511 102 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm25051-201ENSMUST00000158602 249 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Nron-204ENSMUST00000158971 370 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm8580-201ENSMUST00000160295 464 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm16289-201ENSMUST00000162079 183 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Mir3076-201ENSMUST00000175415 60 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm27544-201ENSMUST00000185069 155 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Trbv6-201ENSMUST00000193743 276 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm43096-201ENSMUST00000196173 421 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm45288-201ENSMUST00000210236 151 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm45252-201ENSMUST00000211579 397 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm45791-201ENSMUST00000212908 352 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm42701-201ENSMUST00000196117 1657 ntBASIC1.39□□□□□ -2.19
Trav8-1A0A075B641 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm23472-201ENSMUST00000101806 191 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm25090-201ENSMUST00000104000 132 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm23803-201ENSMUST00000104610 132 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm24403-201ENSMUST00000104616 130 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm14795-201ENSMUST00000118461 471 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm14881-201ENSMUST00000120366 372 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm23889-201ENSMUST00000122689 104 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm14333-201ENSMUST00000130484 264 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm24497-201ENSMUST00000177868 191 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm25939-201ENSMUST00000179876 191 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm9892-201ENSMUST00000182415 992 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm5224-201ENSMUST00000183060 350 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Mir7658-201ENSMUST00000184043 57 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm37708-201ENSMUST00000192337 895 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Gm37353-201ENSMUST00000194497 313 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Mir6925-201ENSMUST00000197857 70 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.38□□□□□ -2.19
Trav8-1A0A075B641 AC140785.1-201ENSMUST00000217782 383 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms