Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Gm14915-201ENSMUST00000120747 204 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm22026-201ENSMUST00000122735 281 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm17187-201ENSMUST00000164622 410 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm17186-201ENSMUST00000171742 456 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm28650-201ENSMUST00000188413 411 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm18551-201ENSMUST00000195594 642 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm17911-201ENSMUST00000210806 877 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm45551-201ENSMUST00000211459 928 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm18252-203ENSMUST00000215855 757 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm25856-201ENSMUST00000082786 75 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.55□□□□□ -2
Cldn13Q9Z0S4 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm23747-201ENSMUST00000104228 131 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm13614-201ENSMUST00000117306 503 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm13627-201ENSMUST00000119700 706 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm13751-201ENSMUST00000120280 752 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm11582-201ENSMUST00000121041 236 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm6265-201ENSMUST00000149263 231 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm23325-201ENSMUST00000157422 129 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm23668-201ENSMUST00000157465 111 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm20415-201ENSMUST00000172877 423 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm22858-201ENSMUST00000174972 76 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm25470-201ENSMUST00000175576 111 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Mir6993-201ENSMUST00000184912 65 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm28438-201ENSMUST00000188299 345 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm38075-201ENSMUST00000191979 920 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm44393-201ENSMUST00000197418 138 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm19540-201ENSMUST00000221843 810 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm24622-201ENSMUST00000082619 162 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm25008-201ENSMUST00000083809 81 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cldn13Q9Z0S4 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm11356-201ENSMUST00000118974 192 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm22718-201ENSMUST00000122701 315 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm25979-201ENSMUST00000157177 138 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm23895-201ENSMUST00000158108 160 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm8338-201ENSMUST00000163928 363 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm6395-201ENSMUST00000167639 691 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm8649-201ENSMUST00000181799 233 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Mir6372-201ENSMUST00000185114 109 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm38213-201ENSMUST00000193203 173 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm29754-201ENSMUST00000206269 358 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm44718-201ENSMUST00000206886 359 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm44688-201ENSMUST00000209083 537 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm30534-201ENSMUST00000217928 207 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.53□□□□□ -2
Cldn13Q9Z0S4 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cldn13Q9Z0S4 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn13Q9Z0S4 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn13Q9Z0S4 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.52□□□□□ -2.01
Cldn13Q9Z0S4 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn13Q9Z0S4 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
Cldn13Q9Z0S4 Gm11598-201ENSMUST00000119257 357 ntBASIC2.52□□□□□ -2.01
Cldn13Q9Z0S4 Gm16021-201ENSMUST00000121176 219 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms