Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Mir542-201ENSMUST00000102186 85 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm13588-201ENSMUST00000120026 135 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm12721-201ENSMUST00000120621 268 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm16458-201ENSMUST00000121428 502 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm22727-201ENSMUST00000158090 116 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm44181-201ENSMUST00000203106 483 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Scn8aQ9WTU3 Mir758-201ENSMUST00000103260 81 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm15106-201ENSMUST00000119691 821 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm13574-201ENSMUST00000120482 394 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm25488-201ENSMUST00000158728 118 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm5929-201ENSMUST00000166883 487 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Mir5136-201ENSMUST00000175573 76 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm27025-201ENSMUST00000182392 942 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm44408-201ENSMUST00000200205 66 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm35931-201ENSMUST00000203931 448 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm46146-201ENSMUST00000217483 346 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm9174-201ENSMUST00000078149 255 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm26226-201ENSMUST00000082509 116 ntBASIC2.04□□□□□ -2.08
Scn8aQ9WTU3 Gm25377-201ENSMUST00000104334 129 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm13627-201ENSMUST00000119700 706 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm27753-201ENSMUST00000184742 203 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm11797-201ENSMUST00000121336 754 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm22521-201ENSMUST00000158272 134 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm25902-201ENSMUST00000158493 318 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm44076-201ENSMUST00000203072 520 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Scn8aQ9WTU3 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm15116-201ENSMUST00000122248 663 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm23670-201ENSMUST00000157469 119 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm23505-201ENSMUST00000158989 130 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm37418-201ENSMUST00000195031 274 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm25820-201ENSMUST00000198589 127 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm43295-201ENSMUST00000201439 412 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm22683-201ENSMUST00000082854 137 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.02□□□□□ -2.09
Scn8aQ9WTU3 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms