Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.29□□□□□ -2.04
Scn11aQ9R053 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.29□□□□□ -2.04
Scn11aQ9R053 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Scn11aQ9R053 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Scn11aQ9R053 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Scn11aQ9R053 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Scn11aQ9R053 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Scn11aQ9R053 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Gm12432-201ENSMUST00000119540 186 ntBASIC2.28□□□□□ -2.04
Scn11aQ9R053 Gm6112-201ENSMUST00000208037 629 ntBASIC2.28□□□□□ -2.04
Scn11aQ9R053 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.28□□□□□ -2.04
Scn11aQ9R053 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Scn11aQ9R053 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Gm5900-201ENSMUST00000179862 375 ntBASIC2.28□□□□□ -2.04
Scn11aQ9R053 Gm27468-201ENSMUST00000183577 106 ntBASIC2.28□□□□□ -2.04
Scn11aQ9R053 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Gm43550-201ENSMUST00000200597 303 ntBASIC2.28□□□□□ -2.04
Scn11aQ9R053 Gm17872-201ENSMUST00000222550 532 ntBASIC2.28□□□□□ -2.04
Scn11aQ9R053 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Scn11aQ9R053 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm24342-201ENSMUST00000103907 104 ntBASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm22083-201ENSMUST00000157586 102 ntBASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm25831-201ENSMUST00000158924 163 ntBASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm28163-201ENSMUST00000187099 325 ntBASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm28745-201ENSMUST00000190069 305 ntBASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm10088-201ENSMUST00000074116 423 ntBASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Scn11aQ9R053 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.27□□□□□ -2.05
Scn11aQ9R053 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Scn11aQ9R053 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm8292-201ENSMUST00000162574 396 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm43582-201ENSMUST00000196149 343 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm23140-201ENSMUST00000082487 107 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm28200-201ENSMUST00000187778 315 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm29378-201ENSMUST00000188723 315 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm28909-201ENSMUST00000189406 315 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Scn11aQ9R053 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Scn11aQ9R053 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Scn11aQ9R053 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.25□□□□□ -2.05
Scn11aQ9R053 Gm22225-201ENSMUST00000157358 278 ntBASIC2.25□□□□□ -2.05
Scn11aQ9R053 AC129323.1-201ENSMUST00000216733 470 ntBASIC2.25□□□□□ -2.05
Scn11aQ9R053 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.25□□□□□ -2.05
Scn11aQ9R053 Gm24044-201ENSMUST00000083107 156 ntBASIC2.25□□□□□ -2.05
Scn11aQ9R053 Snord104-201ENSMUST00000083192 70 ntBASIC2.25□□□□□ -2.05
Scn11aQ9R053 Gm25124-201ENSMUST00000083345 164 ntBASIC2.25□□□□□ -2.05
Scn11aQ9R053 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.25□□□□□ -2.05
Scn11aQ9R053 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.24□□□□□ -2.05
Scn11aQ9R053 Gm12550-201ENSMUST00000118478 329 ntBASIC2.24□□□□□ -2.05
Scn11aQ9R053 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Scn11aQ9R053 Gm12706-201ENSMUST00000121588 698 ntBASIC2.24□□□□□ -2.05
Scn11aQ9R053 Gm22026-201ENSMUST00000122735 281 ntBASIC2.24□□□□□ -2.05
Scn11aQ9R053 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Scn11aQ9R053 Gm22761-201ENSMUST00000102278 96 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm11433-201ENSMUST00000118318 228 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm15106-201ENSMUST00000119691 821 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm17186-201ENSMUST00000171742 456 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Mir365-2-201ENSMUST00000083555 112 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm22469-201ENSMUST00000104118 133 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm14020-201ENSMUST00000118165 662 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm22853-201ENSMUST00000174974 131 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm7094-201ENSMUST00000178379 366 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm45063-201ENSMUST00000203726 472 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Gm9375-201ENSMUST00000208899 903 ntBASIC2.23□□□□□ -2.05
Scn11aQ9R053 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Scn11aQ9R053 Gm24061-201ENSMUST00000157489 120 ntBASIC2.22□□□□□ -2.05
Scn11aQ9R053 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.22□□□□□ -2.05
Scn11aQ9R053 Gm25976-201ENSMUST00000158695 130 ntBASIC2.22□□□□□ -2.05
Scn11aQ9R053 Gm27733-201ENSMUST00000184803 68 ntBASIC2.22□□□□□ -2.05
Scn11aQ9R053 Gm37054-201ENSMUST00000193481 543 ntBASIC2.22□□□□□ -2.05
Scn11aQ9R053 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.22□□□□□ -2.05
Scn11aQ9R053 Gm42960-201ENSMUST00000202160 241 ntBASIC2.22□□□□□ -2.05
Scn11aQ9R053 Gm20039-201ENSMUST00000210329 394 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms