Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm26341-201ENSMUST00000104561 134 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm23599-201ENSMUST00000157261 251 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm16236-201ENSMUST00000159588 379 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm8580-201ENSMUST00000160295 464 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm27220-201ENSMUST00000183453 262 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm5374-201ENSMUST00000222868 657 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm9762-201ENSMUST00000036976 444 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm6030-201ENSMUST00000078768 402 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ccdc3Q9D6Y1 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm25526-201ENSMUST00000104332 132 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm22794-201ENSMUST00000157228 306 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm7346-201ENSMUST00000169661 476 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm27369-201ENSMUST00000185182 71 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm9696-202ENSMUST00000191541 830 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm37866-201ENSMUST00000191950 696 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm43407-201ENSMUST00000199816 317 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm45048-201ENSMUST00000207058 429 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm44844-201ENSMUST00000207242 336 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm7753-201ENSMUST00000221007 867 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Gm22507-201ENSMUST00000082773 160 ntBASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Ccdc3Q9D6Y1 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Mir599-201ENSMUST00000102378 88 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm25945-201ENSMUST00000122484 135 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Nron-204ENSMUST00000158971 370 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm8338-201ENSMUST00000163928 363 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm17063-201ENSMUST00000168135 456 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm27999-201ENSMUST00000183539 193 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm2719-201ENSMUST00000191929 444 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm17935-201ENSMUST00000196649 772 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm8209-201ENSMUST00000206386 553 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm45678-201ENSMUST00000210509 295 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm18645-202ENSMUST00000212222 760 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm18039-201ENSMUST00000217816 728 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm9174-201ENSMUST00000078149 255 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.43□□□□□ -2.02
Ccdc3Q9D6Y1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm14469-201ENSMUST00000118363 202 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm25866-201ENSMUST00000158245 112 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm24210-201ENSMUST00000158263 133 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm16232-201ENSMUST00000162856 167 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Mir6363-201ENSMUST00000184880 114 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms