Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mir6539-201ENSMUST00000183732 110 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm20257-202ENSMUST00000188643 130 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm19123-201ENSMUST00000190716 651 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm37692-201ENSMUST00000192633 232 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm36946-201ENSMUST00000192706 435 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm43427-201ENSMUST00000198188 331 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm44446-201ENSMUST00000204864 255 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm44521-201ENSMUST00000206469 217 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm6462-201ENSMUST00000081488 304 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm26446-201ENSMUST00000082455 103 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm7381-201ENSMUST00000098958 300 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim42Q9D2H5 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm14119-201ENSMUST00000119511 235 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm13903-201ENSMUST00000120945 193 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm25720-201ENSMUST00000157503 105 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm24537-201ENSMUST00000157950 102 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm22384-201ENSMUST00000158187 104 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm26287-201ENSMUST00000158887 81 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm23921-201ENSMUST00000175258 107 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm27285-201ENSMUST00000183875 127 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Mir6911-201ENSMUST00000184241 69 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 AC124739.2-201ENSMUST00000222201 109 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 AC154282.1-201ENSMUST00000223154 265 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm25821-201ENSMUST00000093657 133 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Trim42Q9D2H5 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm22370-201ENSMUST00000102422 83 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm24429-201ENSMUST00000104076 132 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm15846-201ENSMUST00000116022 320 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm14714-201ENSMUST00000119743 439 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm14656-201ENSMUST00000120342 502 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm25865-201ENSMUST00000158247 104 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm3191-201ENSMUST00000167139 346 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Mir7087-201ENSMUST00000184840 70 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm28943-201ENSMUST00000186187 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm28736-201ENSMUST00000186257 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm29401-201ENSMUST00000186690 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm29178-204ENSMUST00000186784 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm28589-201ENSMUST00000186991 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm28453-203ENSMUST00000187041 189 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm28936-201ENSMUST00000187153 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm29121-201ENSMUST00000187611 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm28243-201ENSMUST00000187801 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm28844-202ENSMUST00000187977 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm29058-201ENSMUST00000189510 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm29624-201ENSMUST00000190018 615 ntBASIC4.77□□□□□ -1.65
Trim42Q9D2H5 Gm28780-201ENSMUST00000190223 615 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms