Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm17064-201ENSMUST00000167690 452 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm23268-201ENSMUST00000175494 78 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm22111-201ENSMUST00000178010 79 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm23687-201ENSMUST00000178664 79 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm24566-201ENSMUST00000179286 79 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm23305-201ENSMUST00000179342 79 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm26389-201ENSMUST00000179819 79 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm22130-201ENSMUST00000179979 79 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm22393-201ENSMUST00000180153 79 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm25528-201ENSMUST00000180264 132 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm25085-201ENSMUST00000180298 79 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm5224-201ENSMUST00000183060 350 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm20915-201ENSMUST00000191575 663 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm18956-201ENSMUST00000192857 480 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm44300-201ENSMUST00000196792 121 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm18982-201ENSMUST00000198118 529 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gm44720-201ENSMUST00000206076 260 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Lsm1Q8VC85 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm14579-201ENSMUST00000117068 283 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm14677-201ENSMUST00000117866 486 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm14240-201ENSMUST00000120353 546 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm13443-201ENSMUST00000120770 555 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm25979-201ENSMUST00000157177 138 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm25490-201ENSMUST00000158734 130 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm16232-201ENSMUST00000162856 167 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm22776-201ENSMUST00000178634 94 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm23767-201ENSMUST00000179278 94 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm21638-201ENSMUST00000179473 836 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm37098-201ENSMUST00000192290 244 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm45696-201ENSMUST00000212088 985 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm45879-201ENSMUST00000212521 392 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm5655-201ENSMUST00000221078 901 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lsm1Q8VC85 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm15936-201ENSMUST00000118706 460 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm12897-201ENSMUST00000120341 250 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm26027-201ENSMUST00000122725 268 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm22560-201ENSMUST00000157332 120 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm23223-201ENSMUST00000158119 127 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Mir3112-201ENSMUST00000175431 82 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm27599-201ENSMUST00000183758 174 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm18448-201ENSMUST00000186286 599 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm17935-201ENSMUST00000196649 772 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm17937-201ENSMUST00000197908 742 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.44□□□□□ -2.02
Lsm1Q8VC85 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Lsm1Q8VC85 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms