Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Ushbp1Q8R370 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm14816-201ENSMUST00000117174 294 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm15783-201ENSMUST00000117521 633 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm14594-201ENSMUST00000118052 537 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm14590-201ENSMUST00000118934 537 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm9043-201ENSMUST00000119677 314 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm11904-201ENSMUST00000120562 248 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm24314-201ENSMUST00000158274 123 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm26028-201ENSMUST00000158660 294 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm2862-201ENSMUST00000161524 328 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Mir3964-201ENSMUST00000174898 74 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm14596-201ENSMUST00000180268 537 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm14595-201ENSMUST00000180335 537 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm27828-201ENSMUST00000184108 119 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Mir6385-201ENSMUST00000184295 105 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm45312-201ENSMUST00000210566 311 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm45402-201ENSMUST00000211796 223 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm23404-201ENSMUST00000082543 97 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Snora7a-201ENSMUST00000082629 140 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Ushbp1Q8R370 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.38□□□□□ -1.71
Ushbp1Q8R370 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Mir759-201ENSMUST00000103254 98 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm23577-201ENSMUST00000103950 110 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Snord70-201ENSMUST00000104157 87 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm24831-201ENSMUST00000116778 126 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm23753-201ENSMUST00000157575 149 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm24014-201ENSMUST00000157728 157 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm24419-201ENSMUST00000157875 332 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm24192-201ENSMUST00000157978 145 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm22945-201ENSMUST00000158557 157 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm24225-201ENSMUST00000158825 98 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm23365-201ENSMUST00000175019 125 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm25960-201ENSMUST00000175110 125 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm44453-201ENSMUST00000175161 126 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm25397-201ENSMUST00000176951 92 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm25195-201ENSMUST00000177656 126 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Mir6938-201ENSMUST00000184173 63 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm17829-201ENSMUST00000219782 344 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm26056-201ENSMUST00000083043 104 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.37□□□□□ -1.71
Ushbp1Q8R370 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm11784-201ENSMUST00000118568 474 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm11798-201ENSMUST00000119150 421 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm22290-201ENSMUST00000177655 107 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm22583-201ENSMUST00000178031 107 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm28016-201ENSMUST00000184594 196 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm29334-201ENSMUST00000190334 357 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Mir7116-201ENSMUST00000195956 70 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm44294-201ENSMUST00000205090 728 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm8745-201ENSMUST00000207846 782 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 AC120553.1-201ENSMUST00000227313 260 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms