Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12268-201ENSMUST00000118398 442 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm15113-201ENSMUST00000119280 836 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm4916-201ENSMUST00000126139 642 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm24213-201ENSMUST00000158255 258 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm27783-201ENSMUST00000183534 105 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm27599-201ENSMUST00000183758 174 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Mir7062-201ENSMUST00000185038 66 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm45400-201ENSMUST00000211603 653 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nup88Q8CEC0 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.66□□□□□ -1.82
Nup88Q8CEC0 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.65□□□□□ -1.82
Nup88Q8CEC0 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.65□□□□□ -1.82
Nup88Q8CEC0 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm22091-201ENSMUST00000116908 127 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm13717-201ENSMUST00000119868 365 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm24910-201ENSMUST00000157289 272 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm26088-201ENSMUST00000157896 131 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm23025-201ENSMUST00000158769 111 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm37979-201ENSMUST00000193065 712 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm44393-201ENSMUST00000197418 138 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm5322-201ENSMUST00000206142 699 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm9068-201ENSMUST00000217393 455 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm24035-201ENSMUST00000082867 107 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Gm22740-201ENSMUST00000083439 109 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Nup88Q8CEC0 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.65□□□□□ -1.83
Nup88Q8CEC0 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm24671-201ENSMUST00000104159 158 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm14359-201ENSMUST00000118883 424 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm12515-201ENSMUST00000120116 361 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm12044-201ENSMUST00000120335 213 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm14240-201ENSMUST00000120353 546 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm14360-201ENSMUST00000120670 393 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm11438-201ENSMUST00000121582 189 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm14389-201ENSMUST00000140453 241 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm9498-201ENSMUST00000140849 291 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm25341-201ENSMUST00000157461 268 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm17183-201ENSMUST00000171170 493 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm6651-201ENSMUST00000189471 271 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm34701-202ENSMUST00000204685 360 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm23615-201ENSMUST00000082602 65 ntBASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.64□□□□□ -1.83
Nup88Q8CEC0 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Gm14899-201ENSMUST00000118673 548 ntBASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Gm11357-201ENSMUST00000119758 954 ntBASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Gm15244-201ENSMUST00000121122 130 ntBASIC3.63□□□□□ -1.83
Nup88Q8CEC0 Gm12819-201ENSMUST00000122223 629 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms