Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm14775-201ENSMUST00000122089 310 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm25909-201ENSMUST00000157619 121 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm24853-201ENSMUST00000158026 121 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm22531-201ENSMUST00000158819 140 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm7094-201ENSMUST00000178379 366 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm27535-201ENSMUST00000183814 157 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm27733-201ENSMUST00000184803 68 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm43155-201ENSMUST00000202661 494 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm7726-201ENSMUST00000206241 231 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm45588-201ENSMUST00000211213 630 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm17989-201ENSMUST00000211543 412 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Vps53Q8CCB4 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm23744-201ENSMUST00000104231 149 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Mir669i-201ENSMUST00000117007 127 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm15399-201ENSMUST00000118055 724 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm15613-201ENSMUST00000118396 326 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm14307-201ENSMUST00000118930 291 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm14297-201ENSMUST00000129110 291 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm25883-201ENSMUST00000157781 271 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm28920-201ENSMUST00000189957 699 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm18403-201ENSMUST00000192907 529 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm38044-201ENSMUST00000192964 487 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm43035-201ENSMUST00000197626 517 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm43804-201ENSMUST00000198280 456 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm44092-201ENSMUST00000204470 258 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm19140-201ENSMUST00000209790 421 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm9068-201ENSMUST00000217393 455 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 AC116460.1-201ENSMUST00000219040 313 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm24626-201ENSMUST00000082621 161 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm24268-201ENSMUST00000082990 110 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm26111-201ENSMUST00000083969 106 ntBASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Vps53Q8CCB4 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm14428-201ENSMUST00000120408 822 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Mir1898-201ENSMUST00000122643 83 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm22597-201ENSMUST00000157602 80 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm23024-201ENSMUST00000158770 292 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm27028-201ENSMUST00000182303 399 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm18602-201ENSMUST00000209794 851 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Vps53Q8CCB4 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm9309-201ENSMUST00000223537 546 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm25079-201ENSMUST00000082529 203 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Gm22508-201ENSMUST00000082772 110 ntBASIC4.3□□□□□ -1.72
Vps53Q8CCB4 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 125.3 ms