Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm24572-201ENSMUST00000175505 88 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm27427-201ENSMUST00000185134 193 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm19244-201ENSMUST00000204340 253 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm45687-201ENSMUST00000209454 155 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 AC153975.1-201ENSMUST00000220087 926 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Col6a6Q8C6K9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm13424-201ENSMUST00000122301 354 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm22698-201ENSMUST00000175375 108 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm19057-201ENSMUST00000194329 1197 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm38238-201ENSMUST00000194334 346 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm7407-201ENSMUST00000208301 568 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm37407-201ENSMUST00000194793 1316 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm23336-201ENSMUST00000117023 123 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm14020-201ENSMUST00000118165 662 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm5937-201ENSMUST00000119715 643 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm29429-201ENSMUST00000187071 121 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Mir7021-201ENSMUST00000197026 63 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Gm42960-201ENSMUST00000202160 241 ntBASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Col6a6Q8C6K9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm44435-201ENSMUST00000204379 4119 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm36960-201ENSMUST00000195491 2035 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm12383-201ENSMUST00000120628 760 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm25669-201ENSMUST00000157699 112 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm22853-201ENSMUST00000174974 131 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm28802-201ENSMUST00000188624 944 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm37778-201ENSMUST00000191732 190 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm7182-201ENSMUST00000193351 732 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm44938-201ENSMUST00000208614 427 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Gm44845-201ENSMUST00000208773 335 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Col6a6Q8C6K9 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm13487-201ENSMUST00000122240 864 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm25150-201ENSMUST00000157121 60 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm24561-201ENSMUST00000175182 95 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm29262-201ENSMUST00000190084 196 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm29884-201ENSMUST00000218403 453 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm7530-201ENSMUST00000218466 605 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm12803-201ENSMUST00000118907 821 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm12432-201ENSMUST00000119540 186 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm16490-201ENSMUST00000165299 351 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm37037-201ENSMUST00000194475 424 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm2142-201ENSMUST00000197899 589 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm43848-201ENSMUST00000198060 1247 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm45445-201ENSMUST00000209586 232 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm7751-201ENSMUST00000212868 709 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 AC116656.1-201ENSMUST00000227040 755 ntBASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC1.52□□□□□ -2.17
Col6a6Q8C6K9 Gm13457-201ENSMUST00000117885 267 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm14541-201ENSMUST00000118985 157 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm29597-201ENSMUST00000188035 308 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm28155-201ENSMUST00000191066 151 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Trbv22-201ENSMUST00000191697 291 ntBASIC1.51□□□□□ -2.17
Col6a6Q8C6K9 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms