Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm24132-201ENSMUST00000104745 91 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm15206-201ENSMUST00000119143 454 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm22326-201ENSMUST00000158897 351 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm37796-201ENSMUST00000195327 134 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm4714-201ENSMUST00000203395 279 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm4045-201ENSMUST00000204076 310 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm24616-201ENSMUST00000083274 139 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim47Q8C0E3 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Mir147-201ENSMUST00000102354 79 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm22657-201ENSMUST00000104197 132 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm15151-201ENSMUST00000117106 177 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 AA413626-201ENSMUST00000121125 494 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm22613-201ENSMUST00000122679 292 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm23232-201ENSMUST00000157300 105 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm23044-201ENSMUST00000157891 100 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm23219-201ENSMUST00000158123 87 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm26034-201ENSMUST00000158154 116 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm25015-201ENSMUST00000158400 128 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm17119-201ENSMUST00000163943 280 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm20542-201ENSMUST00000174582 372 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm25935-201ENSMUST00000178746 107 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm42428-201ENSMUST00000198677 302 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm43309-201ENSMUST00000200837 458 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 AC150901.1-201ENSMUST00000208407 145 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim47Q8C0E3 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.34□□□□□ -1.56
Trim47Q8C0E3 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
Trim47Q8C0E3 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Trim47Q8C0E3 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Mir879-201ENSMUST00000104703 76 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm11631-201ENSMUST00000119220 156 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm22766-201ENSMUST00000158372 99 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm21960-201ENSMUST00000181924 452 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm42694-201ENSMUST00000196951 358 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim47Q8C0E3 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm24671-201ENSMUST00000104159 158 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm22899-201ENSMUST00000104540 131 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm12328-201ENSMUST00000118611 197 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm12237-201ENSMUST00000120158 470 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm13557-201ENSMUST00000120771 382 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm14581-201ENSMUST00000121726 198 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm24690-201ENSMUST00000157759 97 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm22212-201ENSMUST00000158096 106 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm5558-201ENSMUST00000178933 495 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Mir6975-201ENSMUST00000184879 61 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm43250-201ENSMUST00000196536 273 ntBASIC5.32□□□□□ -1.56
Trim47Q8C0E3 Gm18011-201ENSMUST00000203717 565 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms