Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm37900-201ENSMUST00000195510 3805 ntBASIC6.15□□□□□ -1.43
Trim35Q8C006 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Trim35Q8C006 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Trim35Q8C006 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim35Q8C006 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim35Q8C006 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Gm14500-201ENSMUST00000121647 113 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 Hba-ps4-201ENSMUST00000128900 447 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Gm44054-201ENSMUST00000203814 372 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 Gm45215-201ENSMUST00000206407 395 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 Gm4083-201ENSMUST00000207158 451 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim35Q8C006 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.14□□□□□ -1.43
Trim35Q8C006 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim35Q8C006 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Snora35-201ENSMUST00000104579 128 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm14602-201ENSMUST00000118625 340 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm22946-201ENSMUST00000158558 82 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm23386-201ENSMUST00000158585 144 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm20620-201ENSMUST00000177528 168 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Mir6399-201ENSMUST00000184050 84 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm22686-201ENSMUST00000082847 100 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Mir201-201ENSMUST00000083470 66 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim35Q8C006 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim35Q8C006 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Trim35Q8C006 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim35Q8C006 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.13□□□□□ -1.43
Trim35Q8C006 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim35Q8C006 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim35Q8C006 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim35Q8C006 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim35Q8C006 Gm15696-201ENSMUST00000121730 445 ntBASIC6.12□□□□□ -1.43
Trim35Q8C006 Gm12238-201ENSMUST00000127764 124 ntBASIC6.12□□□□□ -1.43
Trim35Q8C006 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim35Q8C006 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim35Q8C006 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim35Q8C006 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.12□□□□□ -1.43
Trim35Q8C006 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.12□□□□□ -1.43
Trim35Q8C006 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.12□□□□□ -1.43
Trim35Q8C006 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.12□□□□□ -1.43
Trim35Q8C006 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim35Q8C006 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Trim35Q8C006 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim35Q8C006 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim35Q8C006 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim35Q8C006 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim35Q8C006 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.11□□□□□ -1.43
Trim35Q8C006 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim35Q8C006 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim35Q8C006 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim35Q8C006 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim35Q8C006 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim35Q8C006 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim35Q8C006 Snord78-201ENSMUST00000104032 66 ntBASIC6.11□□□□□ -1.43
Trim35Q8C006 Gm24283-201ENSMUST00000104233 107 ntBASIC6.11□□□□□ -1.43
Trim35Q8C006 Gm8692-201ENSMUST00000118102 438 ntBASIC6.11□□□□□ -1.43
Trim35Q8C006 Gm13338-201ENSMUST00000120235 361 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms