Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm14877-201ENSMUST00000119803 478 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm22145-201ENSMUST00000157396 148 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm24507-201ENSMUST00000157683 134 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm23964-201ENSMUST00000157966 107 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm26195-201ENSMUST00000175035 101 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm27851-201ENSMUST00000183529 63 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm42453-201ENSMUST00000200477 409 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm18540-201ENSMUST00000204025 526 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm44977-201ENSMUST00000205283 420 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm45007-201ENSMUST00000206237 366 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Gm8274-201ENSMUST00000219820 463 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Pcdh19Q80TF3 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm5379-201ENSMUST00000120973 826 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm27926-201ENSMUST00000157180 66 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm16318-201ENSMUST00000162402 601 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm16326-201ENSMUST00000162843 414 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm24862-201ENSMUST00000179103 79 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm23310-201ENSMUST00000179105 79 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm25461-201ENSMUST00000179293 79 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Mir7031-201ENSMUST00000183860 65 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm27624-201ENSMUST00000185047 177 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm18956-201ENSMUST00000192857 480 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm44757-201ENSMUST00000206373 157 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm44922-201ENSMUST00000206690 90 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm23300-201ENSMUST00000082712 125 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.67□□□□□ -1.66
Pcdh19Q80TF3 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm25538-201ENSMUST00000101943 107 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm26279-201ENSMUST00000157095 102 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm26149-201ENSMUST00000157432 108 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm25665-201ENSMUST00000157695 110 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm23318-201ENSMUST00000158000 108 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm22389-201ENSMUST00000158193 301 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm22257-201ENSMUST00000158687 301 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm20428-201ENSMUST00000174365 283 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Mir6410-201ENSMUST00000184204 104 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm34073-201ENSMUST00000195736 212 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm18011-201ENSMUST00000203717 565 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm45380-201ENSMUST00000210465 315 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm25081-201ENSMUST00000082534 108 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Gm22628-201ENSMUST00000082988 107 ntBASIC4.66□□□□□ -1.66
Pcdh19Q80TF3 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms