Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Scn10aQ6QIY3 Gm44609-201ENSMUST00000207157 460 ntBASIC2.39□□□□□ -2.03
Scn10aQ6QIY3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm25068-201ENSMUST00000103895 110 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm7974-201ENSMUST00000117154 408 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm16510-201ENSMUST00000153501 249 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm24900-201ENSMUST00000158128 134 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm25198-201ENSMUST00000178574 110 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Mir6352-201ENSMUST00000184495 116 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm27608-201ENSMUST00000184822 162 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm44490-201ENSMUST00000198566 127 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm44425-201ENSMUST00000203739 429 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm45380-201ENSMUST00000210465 315 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm9009-201ENSMUST00000117321 326 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm23342-201ENSMUST00000158958 115 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm37616-201ENSMUST00000193974 322 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm35931-201ENSMUST00000203931 448 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.38□□□□□ -2.03
Scn10aQ6QIY3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Mir878-201ENSMUST00000104680 78 ntBASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Gm13574-201ENSMUST00000120482 394 ntBASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Gm9225-201ENSMUST00000121921 836 ntBASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Gm44718-201ENSMUST00000206886 359 ntBASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Scn10aQ6QIY3 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm14008-201ENSMUST00000120483 274 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm24475-201ENSMUST00000157435 143 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm27233-201ENSMUST00000184030 307 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm28623-201ENSMUST00000187219 192 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm45701-201ENSMUST00000212049 235 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm14579-201ENSMUST00000117068 283 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm24857-201ENSMUST00000158061 310 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm16326-201ENSMUST00000162843 414 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm7675-201ENSMUST00000208828 686 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 AC154562.1-201ENSMUST00000226140 966 ntBASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Scn10aQ6QIY3 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm15844-201ENSMUST00000118016 576 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm12495-201ENSMUST00000119750 447 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm16458-201ENSMUST00000121428 502 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm15116-201ENSMUST00000122248 663 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm23599-201ENSMUST00000157261 251 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm20776-201ENSMUST00000189940 700 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm5731-201ENSMUST00000190969 481 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Scn10aQ6QIY3 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.34□□□□□ -2.03
Scn10aQ6QIY3 Gm14469-201ENSMUST00000118363 202 ntBASIC2.34□□□□□ -2.03
Scn10aQ6QIY3 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Scn10aQ6QIY3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.34□□□□□ -2.03
Scn10aQ6QIY3 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Scn10aQ6QIY3 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.34□□□□□ -2.03
Scn10aQ6QIY3 Gm43967-201ENSMUST00000203787 301 ntBASIC2.34□□□□□ -2.03
Scn10aQ6QIY3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Scn10aQ6QIY3 Gm24144-201ENSMUST00000082632 111 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms