Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm14020-201ENSMUST00000118165 662 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm27025-201ENSMUST00000182392 942 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm18448-201ENSMUST00000186286 599 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm43901-201ENSMUST00000203247 453 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm45445-201ENSMUST00000209586 232 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 AC129323.1-201ENSMUST00000216733 470 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm17872-201ENSMUST00000222550 532 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Mir878-201ENSMUST00000104680 78 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm25979-201ENSMUST00000157177 138 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm17161-201ENSMUST00000169187 524 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm24656-201ENSMUST00000177548 132 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm23714-201ENSMUST00000179259 105 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 CT030194.2-201ENSMUST00000225752 379 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 CT030662.3-201ENSMUST00000228751 476 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Nup98Q6PFD9 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Nup98Q6PFD9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Gm14885-201ENSMUST00000117969 496 ntBASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Gm12926-201ENSMUST00000121158 409 ntBASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Gm10074-201ENSMUST00000174543 249 ntBASIC2.18□□□□□ -2.06
Nup98Q6PFD9 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.18□□□□□ -2.06
Nup98Q6PFD9 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.18□□□□□ -2.06
Nup98Q6PFD9 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.18□□□□□ -2.06
Nup98Q6PFD9 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Nup98Q6PFD9 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm22486-201ENSMUST00000116815 137 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm7974-201ENSMUST00000117154 408 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm11582-201ENSMUST00000121041 236 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm20776-201ENSMUST00000189940 700 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.17□□□□□ -2.06
Nup98Q6PFD9 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm14602-201ENSMUST00000118625 340 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm12448-201ENSMUST00000118852 655 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm22026-201ENSMUST00000122735 281 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm27979-201ENSMUST00000185126 56 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm32175-201ENSMUST00000193641 346 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Nup98Q6PFD9 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.17□□□□□ -2.06
Nup98Q6PFD9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Gm16331-201ENSMUST00000144274 498 ntBASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Gm22716-201ENSMUST00000177596 107 ntBASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Mir7039-201ENSMUST00000183852 85 ntBASIC2.16□□□□□ -2.06
Nup98Q6PFD9 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.16□□□□□ -2.06
Nup98Q6PFD9 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.16□□□□□ -2.06
Nup98Q6PFD9 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Nup98Q6PFD9 Gm15844-201ENSMUST00000118016 576 ntBASIC2.15□□□□□ -2.06
Nup98Q6PFD9 Gm11843-201ENSMUST00000118984 425 ntBASIC2.15□□□□□ -2.06
Nup98Q6PFD9 Gm26406-201ENSMUST00000158503 124 ntBASIC2.15□□□□□ -2.06
Nup98Q6PFD9 Gm44490-201ENSMUST00000198566 127 ntBASIC2.15□□□□□ -2.06
Nup98Q6PFD9 Gm44881-201ENSMUST00000205425 367 ntBASIC2.15□□□□□ -2.06
Nup98Q6PFD9 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Nup98Q6PFD9 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.15□□□□□ -2.06
Nup98Q6PFD9 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.15□□□□□ -2.06
Nup98Q6PFD9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Nup98Q6PFD9 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Nup98Q6PFD9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Nup98Q6PFD9 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.15□□□□□ -2.07
Nup98Q6PFD9 Gm25832-201ENSMUST00000104140 130 ntBASIC2.14□□□□□ -2.07
Nup98Q6PFD9 Gm22149-201ENSMUST00000104442 136 ntBASIC2.14□□□□□ -2.07
Nup98Q6PFD9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.14□□□□□ -2.07
Nup98Q6PFD9 Snora81-201ENSMUST00000157310 178 ntBASIC2.14□□□□□ -2.07
Nup98Q6PFD9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Nup98Q6PFD9 Gm5900-201ENSMUST00000179862 375 ntBASIC2.14□□□□□ -2.07
Nup98Q6PFD9 Gm28623-201ENSMUST00000187219 192 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms