Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 mt-Td-201ENSMUST00000082404 70 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Snord42a-201ENSMUST00000082606 65 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm22220-201ENSMUST00000082671 149 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Rnf220Q6PDX6 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Mir687-201ENSMUST00000102166 89 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm25919-201ENSMUST00000104271 132 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm22498-201ENSMUST00000104497 86 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm14816-201ENSMUST00000117174 294 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm11633-201ENSMUST00000118176 444 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm4852-201ENSMUST00000121202 729 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm9003-201ENSMUST00000121810 482 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm25391-201ENSMUST00000157342 134 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm15914-201ENSMUST00000161922 309 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Mir6971-201ENSMUST00000183497 63 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm38332-201ENSMUST00000194189 147 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm38088-201ENSMUST00000195829 241 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm6510-201ENSMUST00000195916 574 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm18384-201ENSMUST00000195974 808 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Igkv12-66-201ENSMUST00000199305 348 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm44468-201ENSMUST00000199516 105 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm43309-201ENSMUST00000200837 458 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm45007-201ENSMUST00000206237 366 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm8745-201ENSMUST00000207846 782 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 AC153800.1-201ENSMUST00000219212 365 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Snord15b-201ENSMUST00000083032 145 ntBASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Rnf220Q6PDX6 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm23063-201ENSMUST00000102350 93 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm13343-201ENSMUST00000116474 105 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm13155-201ENSMUST00000119277 646 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm13213-201ENSMUST00000119668 474 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm14980-201ENSMUST00000121247 736 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm8178-201ENSMUST00000121570 646 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm22870-201ENSMUST00000157501 112 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm24507-201ENSMUST00000157683 134 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm24188-201ENSMUST00000157980 108 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm22085-201ENSMUST00000158344 110 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm22257-201ENSMUST00000158687 301 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm24862-201ENSMUST00000179103 79 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm23310-201ENSMUST00000179105 79 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm25461-201ENSMUST00000179293 79 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm23793-201ENSMUST00000179396 117 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm27013-201ENSMUST00000182441 1024 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Mir7022-201ENSMUST00000183749 61 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm27190-201ENSMUST00000184890 542 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm28418-201ENSMUST00000186179 423 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm29574-201ENSMUST00000186226 696 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm28828-201ENSMUST00000186601 696 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm29352-201ENSMUST00000188054 544 ntBASIC3.96□□□□□ -1.78
Rnf220Q6PDX6 Gm29196-201ENSMUST00000189239 618 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms