Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
Sh3rf1Q69ZI1 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Sh3rf1Q69ZI1 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Sh3rf1Q69ZI1 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Sh3rf1Q69ZI1 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.65□□□□□ -1.66
Sh3rf1Q69ZI1 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Sh3rf1Q69ZI1 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm24605-201ENSMUST00000104772 96 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm22488-201ENSMUST00000116811 127 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm14868-201ENSMUST00000117840 216 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm12379-201ENSMUST00000119607 391 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm14926-201ENSMUST00000120650 508 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm8880-201ENSMUST00000121800 454 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm17153-201ENSMUST00000171314 490 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm25235-201ENSMUST00000179933 107 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm17811-201ENSMUST00000206193 387 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm2059-201ENSMUST00000212025 287 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm35857-201ENSMUST00000212739 178 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Gm18016-201ENSMUST00000216119 801 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Mir504-201ENSMUST00000093602 79 ntBASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Sh3rf1Q69ZI1 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23608-201ENSMUST00000104545 128 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm16032-201ENSMUST00000118534 168 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm25390-201ENSMUST00000157341 103 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm24113-201ENSMUST00000157477 276 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm22337-201ENSMUST00000157721 132 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm21816-201ENSMUST00000179255 360 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm28288-201ENSMUST00000191019 214 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm44376-201ENSMUST00000197570 128 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm44402-201ENSMUST00000203677 238 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm45002-201ENSMUST00000208045 120 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm20039-201ENSMUST00000210329 394 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23677-201ENSMUST00000083156 104 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.64□□□□□ -1.67
Sh3rf1Q69ZI1 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23841-201ENSMUST00000116951 114 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm13329-201ENSMUST00000117063 265 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm5391-201ENSMUST00000121155 613 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23959-201ENSMUST00000157208 324 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm25883-201ENSMUST00000157781 271 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm22177-201ENSMUST00000175002 158 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm26828-201ENSMUST00000180640 172 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm27851-201ENSMUST00000183529 63 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm29140-201ENSMUST00000190187 476 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm36934-201ENSMUST00000192007 306 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm37416-201ENSMUST00000193596 318 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms