Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Col7a1Q63870 Gm25787-201ENSMUST00000104709 92 ntBASIC1.46□□□□□ -2.17
Col7a1Q63870 Gm14385-201ENSMUST00000116315 876 ntBASIC1.46□□□□□ -2.17
Col7a1Q63870 Gm14559-201ENSMUST00000121745 496 ntBASIC1.46□□□□□ -2.17
Col7a1Q63870 Gm13487-201ENSMUST00000122240 864 ntBASIC1.46□□□□□ -2.17
Col7a1Q63870 Gm25553-201ENSMUST00000158076 79 ntBASIC1.46□□□□□ -2.17
Col7a1Q63870 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC1.46□□□□□ -2.17
Col7a1Q63870 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.46□□□□□ -2.17
Col7a1Q63870 AC159263.3-201ENSMUST00000223434 460 ntBASIC1.46□□□□□ -2.17
Col7a1Q63870 Mir99a-201ENSMUST00000083596 65 ntBASIC1.46□□□□□ -2.17
Col7a1Q63870 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col7a1Q63870 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Col7a1Q63870 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC1.46□□□□□ -2.18
Col7a1Q63870 Mir343-201ENSMUST00000102360 75 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 Gm22945-201ENSMUST00000158557 157 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 Gm27527-201ENSMUST00000183903 99 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.46□□□□□ -2.18
Col7a1Q63870 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 Gm15115-201ENSMUST00000121145 264 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC1.46□□□□□ -2.18
Col7a1Q63870 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC1.46□□□□□ -2.18
Col7a1Q63870 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col7a1Q63870 Mir320-201ENSMUST00000083594 82 ntBASIC1.46□□□□□ -2.18
Col7a1Q63870 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col7a1Q63870 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Col7a1Q63870 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.45□□□□□ -2.18
Col7a1Q63870 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.45□□□□□ -2.18
Col7a1Q63870 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.45□□□□□ -2.18
Col7a1Q63870 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Col7a1Q63870 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.45□□□□□ -2.18
Col7a1Q63870 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col7a1Q63870 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.45□□□□□ -2.18
Col7a1Q63870 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.45□□□□□ -2.18
Col7a1Q63870 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Col7a1Q63870 Gm23424-201ENSMUST00000103889 110 ntBASIC1.45□□□□□ -2.18
Col7a1Q63870 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC1.45□□□□□ -2.18
Col7a1Q63870 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col7a1Q63870 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.45□□□□□ -2.18
Col7a1Q63870 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col7a1Q63870 Gm12765-201ENSMUST00000117273 615 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm15195-201ENSMUST00000118775 263 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm13082-201ENSMUST00000118877 561 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm25715-201ENSMUST00000158627 125 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm42834-201ENSMUST00000196845 256 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm22740-201ENSMUST00000083439 109 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col7a1Q63870 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm23015-201ENSMUST00000104145 128 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm14655-201ENSMUST00000120124 578 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm13024-201ENSMUST00000121756 718 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col7a1Q63870 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm18188-201ENSMUST00000219386 478 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col7a1Q63870 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm42537-201ENSMUST00000198260 2574 ntBASIC1.44□□□□□ -2.18
Col7a1Q63870 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Col7a1Q63870 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm14804-201ENSMUST00000122322 508 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm27163-201ENSMUST00000184767 409 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm7195-201ENSMUST00000190869 1707 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col7a1Q63870 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col7a1Q63870 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col7a1Q63870 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col7a1Q63870 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm16533-201ENSMUST00000140035 228 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm22389-201ENSMUST00000158193 301 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm18546-201ENSMUST00000197245 676 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm43626-201ENSMUST00000198575 162 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm5471-201ENSMUST00000072732 337 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col7a1Q63870 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm15854-201ENSMUST00000118879 808 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col7a1Q63870 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Gm6850-201ENSMUST00000210031 530 ntBASIC1.43□□□□□ -2.18
Col7a1Q63870 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col7a1Q63870 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col7a1Q63870 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Col7a1Q63870 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.42□□□□□ -2.18
Col7a1Q63870 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col7a1Q63870 Gm27535-201ENSMUST00000183814 157 ntBASIC1.42□□□□□ -2.18
Col7a1Q63870 Gm27979-201ENSMUST00000185126 56 ntBASIC1.42□□□□□ -2.18
Col7a1Q63870 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC1.42□□□□□ -2.18
Col7a1Q63870 Gm14877-201ENSMUST00000119803 478 ntBASIC1.42□□□□□ -2.18
Col7a1Q63870 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC1.42□□□□□ -2.18
Col7a1Q63870 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms