Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim28Q62318 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.68□□□□□ -1.66
Trim28Q62318 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim28Q62318 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Trim28Q62318 Gm26145-201ENSMUST00000104476 127 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm14362-201ENSMUST00000121679 273 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim28Q62318 Gm15254-201ENSMUST00000149567 273 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm23332-201ENSMUST00000157424 275 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim28Q62318 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim28Q62318 Gm25670-201ENSMUST00000178423 107 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm26239-201ENSMUST00000178842 107 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm24267-201ENSMUST00000179841 107 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm33973-201ENSMUST00000195148 534 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm6105-201ENSMUST00000200580 624 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm44059-201ENSMUST00000204048 351 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm45232-201ENSMUST00000207811 162 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm45420-201ENSMUST00000211243 425 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim28Q62318 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.68□□□□□ -1.66
Trim28Q62318 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim28Q62318 Gm24950-201ENSMUST00000082768 191 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm24292-201ENSMUST00000082888 107 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm23971-201ENSMUST00000083317 191 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm23849-201ENSMUST00000083833 191 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm26316-201ENSMUST00000083886 191 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim28Q62318 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim28Q62318 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim28Q62318 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim28Q62318 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.68□□□□□ -1.66
Trim28Q62318 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim28Q62318 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim28Q62318 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim28Q62318 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Trim28Q62318 Gm22563-201ENSMUST00000157333 269 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Gm23667-201ENSMUST00000157466 120 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim28Q62318 Gm20526-201ENSMUST00000173416 158 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Gm28390-201ENSMUST00000185212 700 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim28Q62318 Gm6510-201ENSMUST00000195916 574 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Gm43043-201ENSMUST00000196579 412 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Gm43440-201ENSMUST00000201957 729 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Gm45508-201ENSMUST00000209298 299 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 AC138290.2-201ENSMUST00000218822 369 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Gm23406-201ENSMUST00000082537 122 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Gm24037-201ENSMUST00000082871 180 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim28Q62318 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim28Q62318 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim28Q62318 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Trim28Q62318 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.67□□□□□ -1.66
Trim28Q62318 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim28Q62318 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim28Q62318 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim28Q62318 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Trim28Q62318 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim28Q62318 Gm24079-201ENSMUST00000104352 132 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm14687-201ENSMUST00000120206 363 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm14559-201ENSMUST00000121745 496 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm24936-201ENSMUST00000122598 247 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.66□□□□□ -1.66
Trim28Q62318 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim28Q62318 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim28Q62318 Gm25519-201ENSMUST00000158392 127 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm29231-201ENSMUST00000179850 319 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm8600-201ENSMUST00000186320 905 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm44634-201ENSMUST00000206119 152 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim28Q62318 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim28Q62318 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Gm2710-201ENSMUST00000073196 603 ntBASIC4.66□□□□□ -1.66
Trim28Q62318 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim28Q62318 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim28Q62318 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim28Q62318 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim28Q62318 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
Trim28Q62318 Mir673-201ENSMUST00000102361 91 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm24982-201ENSMUST00000104456 132 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm14558-201ENSMUST00000117458 381 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms