Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim27Q62158 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim27Q62158 Mir1192-201ENSMUST00000116976 121 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm15113-201ENSMUST00000119280 836 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.69□□□□□ -1.82
Trim27Q62158 Gm11229-201ENSMUST00000121993 437 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim27Q62158 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm26271-201ENSMUST00000158349 104 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm18520-201ENSMUST00000174783 658 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm18417-201ENSMUST00000176564 648 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm25194-201ENSMUST00000177987 79 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.69□□□□□ -1.82
Trim27Q62158 Gm27161-201ENSMUST00000183960 562 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm45658-201ENSMUST00000209197 580 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim27Q62158 Gm45588-201ENSMUST00000211213 630 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim27Q62158 Gm7751-201ENSMUST00000212868 709 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim27Q62158 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim27Q62158 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim27Q62158 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Trim27Q62158 Gm25404-201ENSMUST00000082970 107 ntBASIC3.69□□□□□ -1.82
Trim27Q62158 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim27Q62158 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim27Q62158 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim27Q62158 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim27Q62158 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim27Q62158 Gm14973-201ENSMUST00000117248 255 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm11943-201ENSMUST00000119473 327 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm12044-201ENSMUST00000120335 213 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm11389-201ENSMUST00000121407 430 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm23213-201ENSMUST00000122715 313 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm15733-201ENSMUST00000132957 242 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm24534-201ENSMUST00000157949 291 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Mir5136-201ENSMUST00000175573 76 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
Trim27Q62158 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Trim27Q62158 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trim27Q62158 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.68□□□□□ -1.82
Trim27Q62158 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm38154-201ENSMUST00000195444 340 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm42924-201ENSMUST00000197261 185 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm31230-201ENSMUST00000199725 785 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm43393-201ENSMUST00000200147 194 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm45048-201ENSMUST00000207058 429 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm7675-201ENSMUST00000208828 686 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Gm45438-201ENSMUST00000210242 564 ntBASIC3.68□□□□□ -1.82
Trim27Q62158 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim27Q62158 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Trim27Q62158 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim27Q62158 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Trim27Q62158 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim27Q62158 Mir693-201ENSMUST00000102187 89 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm24430-201ENSMUST00000104077 104 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm12268-201ENSMUST00000118398 442 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm12803-201ENSMUST00000118907 821 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm12891-201ENSMUST00000119358 240 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm14815-201ENSMUST00000120060 488 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm14240-201ENSMUST00000120353 546 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm11321-201ENSMUST00000121257 902 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm23053-201ENSMUST00000175136 96 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm26991-201ENSMUST00000180950 620 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm18448-201ENSMUST00000186286 599 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm29330-201ENSMUST00000190032 699 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm28098-201ENSMUST00000191361 699 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm37692-201ENSMUST00000192633 232 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm8242-202ENSMUST00000193056 475 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm8023-201ENSMUST00000195298 903 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim27Q62158 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm43198-201ENSMUST00000200927 326 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.67□□□□□ -1.82
Trim27Q62158 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim27Q62158 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim27Q62158 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.67□□□□□ -1.82
Trim27Q62158 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.66□□□□□ -1.82
Trim27Q62158 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.66□□□□□ -1.82
Trim27Q62158 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim27Q62158 Mir190b-201ENSMUST00000104803 80 ntBASIC3.66□□□□□ -1.82
Trim27Q62158 Gm14981-201ENSMUST00000117325 943 ntBASIC3.66□□□□□ -1.82
Trim27Q62158 Gm13751-201ENSMUST00000120280 752 ntBASIC3.66□□□□□ -1.82
Trim27Q62158 Gm26424-201ENSMUST00000122530 104 ntBASIC3.66□□□□□ -1.82
Trim27Q62158 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.66□□□□□ -1.82
Trim27Q62158 Gm27796-201ENSMUST00000183863 261 ntBASIC3.66□□□□□ -1.82
Trim27Q62158 Gm7870-201ENSMUST00000184467 616 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms