Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Gm27869-201ENSMUST00000184327 122 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.17□□□□□ -2.06
Trav2Q5R1I9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Gm43393-201ENSMUST00000200147 194 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Gm7675-201ENSMUST00000208828 686 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Gm45288-201ENSMUST00000210236 151 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav2Q5R1I9 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav2Q5R1I9 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Trav2Q5R1I9 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Snord14c-201ENSMUST00000101927 86 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Mir1195-201ENSMUST00000116818 98 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm14469-201ENSMUST00000118363 202 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm15106-201ENSMUST00000119691 821 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm8880-201ENSMUST00000121800 454 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm4916-201ENSMUST00000126139 642 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm14333-201ENSMUST00000130484 264 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm23588-201ENSMUST00000157659 99 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm24813-201ENSMUST00000175310 84 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm20718-201ENSMUST00000176058 259 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm22776-201ENSMUST00000178634 94 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm23767-201ENSMUST00000179278 94 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm17937-201ENSMUST00000197908 742 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm18982-201ENSMUST00000198118 529 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm44478-201ENSMUST00000204875 114 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm45522-201ENSMUST00000210784 166 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Trav2Q5R1I9 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm14677-201ENSMUST00000117866 486 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm14129-201ENSMUST00000122436 291 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm24876-201ENSMUST00000158780 92 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm6788-201ENSMUST00000166459 270 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Mir3092-201ENSMUST00000174954 96 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Mir5099-201ENSMUST00000175257 74 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm28779-201ENSMUST00000189678 323 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm37807-201ENSMUST00000194310 190 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm45395-201ENSMUST00000209891 559 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Gm26458-201ENSMUST00000082832 128 ntBASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav2Q5R1I9 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm23476-201ENSMUST00000158881 274 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm27599-201ENSMUST00000183758 174 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Mir7062-201ENSMUST00000185038 66 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm18448-201ENSMUST00000186286 599 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm21489-201ENSMUST00000189668 818 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm37007-201ENSMUST00000194234 319 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm17935-201ENSMUST00000196649 772 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm44720-201ENSMUST00000206076 260 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm45049-201ENSMUST00000207586 591 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm44849-201ENSMUST00000207595 484 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav2Q5R1I9 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Gm23723-201ENSMUST00000082996 132 ntBASIC2.14□□□□□ -2.07
Trav2Q5R1I9 Snord104-201ENSMUST00000083192 70 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms