Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm13082-201ENSMUST00000118877 561 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm2318-201ENSMUST00000119623 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm2005-201ENSMUST00000120759 542 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm23599-201ENSMUST00000157261 251 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm20660-201ENSMUST00000177515 289 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm7438-201ENSMUST00000177664 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm7408-201ENSMUST00000178014 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm7386-201ENSMUST00000178020 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm3657-201ENSMUST00000178170 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm7415-201ENSMUST00000178205 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm7398-201ENSMUST00000178589 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm7391-201ENSMUST00000178680 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm7375-201ENSMUST00000179232 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm3681-201ENSMUST00000179940 639 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Mir6386-201ENSMUST00000183558 104 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm38311-201ENSMUST00000192945 165 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm18551-201ENSMUST00000195594 642 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm44634-201ENSMUST00000206119 152 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm4921-201ENSMUST00000219804 992 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm30738-201ENSMUST00000221346 502 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Gm25792-201ENSMUST00000083289 100 ntBASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Upf3bQ3ULL6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm15193-201ENSMUST00000120224 865 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm25808-201ENSMUST00000122784 284 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm24922-201ENSMUST00000158511 102 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm26701-201ENSMUST00000181571 234 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Mir6383-201ENSMUST00000184545 116 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm44223-201ENSMUST00000204854 114 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm44519-201ENSMUST00000206486 122 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.68□□□□□ -1.98
Upf3bQ3ULL6 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm24122-201ENSMUST00000104107 132 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm25526-201ENSMUST00000104332 132 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm9001-201ENSMUST00000121642 399 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm15986-201ENSMUST00000122153 400 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm25945-201ENSMUST00000122484 135 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm4916-201ENSMUST00000126139 642 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm14333-201ENSMUST00000130484 264 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm16289-201ENSMUST00000162079 183 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm27161-201ENSMUST00000183960 562 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Mir6363-201ENSMUST00000184880 114 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm18956-201ENSMUST00000192857 480 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm4017-201ENSMUST00000084813 338 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Upf3bQ3ULL6 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Gm16431-201ENSMUST00000117454 431 ntBASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Gm17186-201ENSMUST00000171742 456 ntBASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Olfr895-201ENSMUST00000093864 951 ntBASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Upf3bQ3ULL6 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.65□□□□□ -1.98
Upf3bQ3ULL6 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.65□□□□□ -1.98
Upf3bQ3ULL6 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms