Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm24478-201ENSMUST00000157439 158 ntBASIC1.98□□□□□ -2.09
Spg11Q3UHA3 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC1.98□□□□□ -2.09
Spg11Q3UHA3 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
Spg11Q3UHA3 Mir7052-201ENSMUST00000184821 65 ntBASIC1.98□□□□□ -2.09
Spg11Q3UHA3 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC1.98□□□□□ -2.09
Spg11Q3UHA3 AC123064.2-201ENSMUST00000217758 193 ntBASIC1.98□□□□□ -2.09
Spg11Q3UHA3 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.98□□□□□ -2.09
Spg11Q3UHA3 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.98□□□□□ -2.09
Spg11Q3UHA3 AC129308.2-201ENSMUST00000224588 789 ntBASIC1.98□□□□□ -2.09
Spg11Q3UHA3 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm42484-201ENSMUST00000196075 2104 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm29884-201ENSMUST00000218403 453 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm22543-201ENSMUST00000104347 94 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm15161-201ENSMUST00000117340 387 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm28191-201ENSMUST00000189112 211 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm37629-201ENSMUST00000193635 1050 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm18921-201ENSMUST00000221798 366 ntBASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Spg11Q3UHA3 Gm27656-201ENSMUST00000185055 80 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm6501-201ENSMUST00000187178 916 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 AC154224.1-201ENSMUST00000224367 403 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 AC151907.1-201ENSMUST00000228812 412 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm26143-201ENSMUST00000104480 108 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm11356-201ENSMUST00000118974 192 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm26278-201ENSMUST00000157098 132 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm25150-201ENSMUST00000157121 60 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm22316-201ENSMUST00000158012 216 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm2691-201ENSMUST00000203205 901 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm18043-201ENSMUST00000216741 739 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Spg11Q3UHA3 Gm24736-201ENSMUST00000158862 130 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Snord53-201ENSMUST00000175146 78 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm22111-201ENSMUST00000178010 79 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm23687-201ENSMUST00000178664 79 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm24566-201ENSMUST00000179286 79 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm23305-201ENSMUST00000179342 79 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm26389-201ENSMUST00000179819 79 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm22130-201ENSMUST00000179979 79 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm22393-201ENSMUST00000180153 79 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm25085-201ENSMUST00000180298 79 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm44817-201ENSMUST00000205416 453 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm22519-201ENSMUST00000158270 178 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm26983-201ENSMUST00000182051 388 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm19086-201ENSMUST00000190772 665 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 AC079644.1-201ENSMUST00000220586 405 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 AC139294.2-201ENSMUST00000227159 285 ntBASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Spg11Q3UHA3 Gm25647-201ENSMUST00000101832 78 ntBASIC1.94□□□□□ -2.1
Spg11Q3UHA3 Gm25823-201ENSMUST00000101995 78 ntBASIC1.94□□□□□ -2.1
Spg11Q3UHA3 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Spg11Q3UHA3 Gm11460-201ENSMUST00000118200 361 ntBASIC1.94□□□□□ -2.1
Spg11Q3UHA3 Gm14623-201ENSMUST00000121398 603 ntBASIC1.94□□□□□ -2.1
Spg11Q3UHA3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms