Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm11566-201ENSMUST00000118550 203 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm11429-201ENSMUST00000119089 144 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm25860-201ENSMUST00000158252 126 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm22664-201ENSMUST00000158719 105 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm24757-201ENSMUST00000176987 371 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm11395-201ENSMUST00000181011 499 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm37030-201ENSMUST00000194254 295 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm44765-201ENSMUST00000206927 601 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm46194-201ENSMUST00000218136 320 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm8249-201ENSMUST00000219225 465 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm8274-201ENSMUST00000219820 463 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Rnf180Q3U827 Gm22249-201ENSMUST00000082485 136 ntBASIC4.66□□□□□ -1.66
Rnf180Q3U827 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rnf180Q3U827 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Rnf180Q3U827 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Rnf180Q3U827 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Rnf180Q3U827 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Rnf180Q3U827 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Rnf180Q3U827 Gm22195-201ENSMUST00000116861 108 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm11322-201ENSMUST00000118095 435 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm15026-201ENSMUST00000119219 458 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm13475-201ENSMUST00000119290 234 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm14861-201ENSMUST00000119451 455 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm11742-201ENSMUST00000119903 233 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm22136-201ENSMUST00000158751 268 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm17183-201ENSMUST00000171170 493 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm26556-201ENSMUST00000180645 320 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm18964-201ENSMUST00000193013 563 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm43624-201ENSMUST00000197368 180 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm17887-201ENSMUST00000200194 547 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm44654-201ENSMUST00000208052 329 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm2436-201ENSMUST00000219562 774 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm23404-201ENSMUST00000082543 97 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm25134-201ENSMUST00000082646 160 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Rnf180Q3U827 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.65□□□□□ -1.67
Rnf180Q3U827 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Rnf180Q3U827 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm13321-201ENSMUST00000117101 400 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm13478-201ENSMUST00000118312 413 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm16005-201ENSMUST00000120515 269 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm14736-201ENSMUST00000121470 336 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm26373-201ENSMUST00000157833 103 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm23078-201ENSMUST00000157848 148 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm26001-201ENSMUST00000157989 103 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm6625-201ENSMUST00000177870 272 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm26701-201ENSMUST00000181571 234 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Mir7009-201ENSMUST00000184519 64 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm5829-201ENSMUST00000191383 351 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm43932-201ENSMUST00000204499 52 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm45438-201ENSMUST00000210242 564 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm23627-201ENSMUST00000082459 107 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm22502-201ENSMUST00000082488 107 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm26228-201ENSMUST00000082512 107 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm25080-201ENSMUST00000082526 107 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm24149-201ENSMUST00000082757 107 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm23848-201ENSMUST00000083826 106 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm25518-201ENSMUST00000083864 107 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.64□□□□□ -1.67
Rnf180Q3U827 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Rnf180Q3U827 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms