Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Gm23096-201ENSMUST00000083447 107 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col28a1Q2UY11 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm14299-201ENSMUST00000117586 397 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm15313-201ENSMUST00000119179 282 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm12335-201ENSMUST00000119738 327 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm12876-201ENSMUST00000120975 408 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm6058-201ENSMUST00000154261 399 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm25827-201ENSMUST00000157089 107 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm25365-201ENSMUST00000158852 121 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm8532-201ENSMUST00000179174 461 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm26866-201ENSMUST00000180414 802 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Mir6401-201ENSMUST00000184499 109 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm5829-201ENSMUST00000191383 351 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm22897-201ENSMUST00000197860 128 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col28a1Q2UY11 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm24715-201ENSMUST00000102377 95 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm14771-201ENSMUST00000118249 203 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm12458-201ENSMUST00000119387 495 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm2005-201ENSMUST00000120759 542 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm14821-201ENSMUST00000121975 435 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm26276-201ENSMUST00000157099 109 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm23124-201ENSMUST00000157650 107 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm24850-201ENSMUST00000158029 119 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Snord92-201ENSMUST00000175548 85 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm22120-201ENSMUST00000175590 70 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm14527-201ENSMUST00000179300 639 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm29320-201ENSMUST00000185235 615 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm29179-202ENSMUST00000186138 615 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm29448-201ENSMUST00000186675 615 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm29314-201ENSMUST00000186800 615 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm28253-202ENSMUST00000187971 615 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm29169-201ENSMUST00000189835 615 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm37791-201ENSMUST00000195081 286 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm45232-201ENSMUST00000207811 162 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm34779-201ENSMUST00000210036 263 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm45402-201ENSMUST00000211796 223 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm23627-201ENSMUST00000082459 107 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm22502-201ENSMUST00000082488 107 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm24149-201ENSMUST00000082757 107 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm25793-201ENSMUST00000083287 107 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Mir370-201ENSMUST00000083499 79 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm4017-201ENSMUST00000084813 338 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col28a1Q2UY11 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col28a1Q2UY11 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms