Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm6923-201ENSMUST00000118343 406 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm14627-201ENSMUST00000118931 567 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm23230-201ENSMUST00000157298 133 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm28871-201ENSMUST00000186191 687 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm6947-201ENSMUST00000186254 78 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm28412-201ENSMUST00000187243 177 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm10193-201ENSMUST00000188288 231 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm19498-201ENSMUST00000191128 331 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm44376-201ENSMUST00000197570 128 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.43□□□□□ -1.54
Col17a1Q07563 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.43□□□□□ -1.54
Col17a1Q07563 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.43□□□□□ -1.54
Col17a1Q07563 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col17a1Q07563 AC132237.1-201ENSMUST00000220950 4475 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.43□□□□□ -1.54
Col17a1Q07563 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col17a1Q07563 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col17a1Q07563 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col17a1Q07563 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.42□□□□□ -1.54
Col17a1Q07563 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col17a1Q07563 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col17a1Q07563 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col17a1Q07563 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col17a1Q07563 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm13379-201ENSMUST00000118053 621 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm5123-201ENSMUST00000121905 837 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm5755-201ENSMUST00000152394 837 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm20450-201ENSMUST00000173652 147 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm24757-201ENSMUST00000176987 371 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm37996-201ENSMUST00000191859 367 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm37455-201ENSMUST00000191993 529 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm43043-201ENSMUST00000196579 412 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Mir466e-201ENSMUST00000198862 84 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm2436-201ENSMUST00000219562 774 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.42□□□□□ -1.54
Col17a1Q07563 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Gm23628-201ENSMUST00000082464 173 ntBASIC5.42□□□□□ -1.54
Col17a1Q07563 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col17a1Q07563 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col17a1Q07563 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col17a1Q07563 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col17a1Q07563 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col17a1Q07563 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col17a1Q07563 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm14518-201ENSMUST00000117351 542 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm24910-201ENSMUST00000157289 272 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm22216-201ENSMUST00000157557 114 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm23824-201ENSMUST00000158741 276 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm25642-201ENSMUST00000175137 66 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm28149-201ENSMUST00000187102 378 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm28768-201ENSMUST00000189034 378 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.41□□□□□ -1.54
Col17a1Q07563 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm43892-201ENSMUST00000204373 265 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm8319-201ENSMUST00000205708 641 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm45375-201ENSMUST00000210338 280 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm46138-201ENSMUST00000215294 426 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Mir99a-201ENSMUST00000083596 65 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.41□□□□□ -1.54
Col17a1Q07563 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col17a1Q07563 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Col17a1Q07563 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col17a1Q07563 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col17a1Q07563 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm26002-201ENSMUST00000101915 107 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm14987-201ENSMUST00000117820 676 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm12985-201ENSMUST00000118376 183 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm22500-201ENSMUST00000158982 99 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm26177-201ENSMUST00000178683 107 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm27044-201ENSMUST00000183033 796 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 Gm28141-201ENSMUST00000186676 342 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC5.4□□□□□ -1.54
Col17a1Q07563 n-R5s40-201ENSMUST00000082475 124 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms