Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.34□□□□□ -1.71
Msx2Q03358 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.34□□□□□ -1.71
Msx2Q03358 Gm45209-201ENSMUST00000207122 353 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Gm17766-201ENSMUST00000209223 442 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.34□□□□□ -1.71
Msx2Q03358 Gm19790-201ENSMUST00000214414 251 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Gm18904-201ENSMUST00000218756 329 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Msx2Q03358 Gm5265-201ENSMUST00000076828 342 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Gm22741-201ENSMUST00000083438 165 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Mir215-201ENSMUST00000083628 112 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Mir452-201ENSMUST00000093629 85 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msx2Q03358 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msx2Q03358 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.34□□□□□ -1.71
Msx2Q03358 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Msx2Q03358 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.34□□□□□ -1.72
Msx2Q03358 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Msx2Q03358 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.34□□□□□ -1.72
Msx2Q03358 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.34□□□□□ -1.72
Msx2Q03358 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Msx2Q03358 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Msx2Q03358 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Msx2Q03358 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Msx2Q03358 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Msx2Q03358 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Msx2Q03358 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Msx2Q03358 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Msx2Q03358 Gm24124-201ENSMUST00000104103 132 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Mir105-201ENSMUST00000104655 80 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.33□□□□□ -1.72
Msx2Q03358 Gm15148-201ENSMUST00000117602 156 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm11490-201ENSMUST00000118128 272 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm14940-201ENSMUST00000119309 495 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm22514-201ENSMUST00000122547 308 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.33□□□□□ -1.72
Msx2Q03358 Gm10059-201ENSMUST00000131139 171 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Trav20-201ENSMUST00000142754 347 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm27723-201ENSMUST00000157398 63 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm26149-201ENSMUST00000157432 108 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Msx2Q03358 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm29062-201ENSMUST00000186032 694 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm43586-201ENSMUST00000195948 310 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm42814-201ENSMUST00000199370 460 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm18453-201ENSMUST00000208000 626 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.33□□□□□ -1.72
Msx2Q03358 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Gm26446-201ENSMUST00000082455 103 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Gm23796-201ENSMUST00000084011 160 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Gm23741-201ENSMUST00000097237 171 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.33□□□□□ -1.72
Msx2Q03358 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Msx2Q03358 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Msx2Q03358 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Msx2Q03358 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Msx2Q03358 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Msx2Q03358 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Msx2Q03358 Gm24951-201ENSMUST00000102182 109 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Msx2Q03358 Gm24867-201ENSMUST00000104161 107 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm11698-201ENSMUST00000117948 455 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm14500-201ENSMUST00000121647 113 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm23534-201ENSMUST00000157539 97 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm23892-201ENSMUST00000158105 130 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm25923-201ENSMUST00000158312 138 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Scarna6-201ENSMUST00000158656 265 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm25486-201ENSMUST00000158726 63 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm26501-201ENSMUST00000178307 107 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Msx2Q03358 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.32□□□□□ -1.72
Msx2Q03358 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Msx2Q03358 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.32□□□□□ -1.72
Msx2Q03358 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.32□□□□□ -1.72
Msx2Q03358 Gm44054-201ENSMUST00000203814 372 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm44977-201ENSMUST00000205283 420 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 Gm44859-201ENSMUST00000207831 94 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Msx2Q03358 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.32□□□□□ -1.72
Msx2Q03358 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms