Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.83□□□□□ -2.12
HttP42859 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.83□□□□□ -2.12
HttP42859 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HttP42859 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
HttP42859 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HttP42859 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
HttP42859 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HttP42859 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.83□□□□□ -2.12
HttP42859 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.83□□□□□ -2.12
HttP42859 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HttP42859 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.83□□□□□ -2.12
HttP42859 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.83□□□□□ -2.12
HttP42859 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
HttP42859 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.83□□□□□ -2.12
HttP42859 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HttP42859 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HttP42859 Mir99a-201ENSMUST00000083596 65 ntBASIC1.82□□□□□ -2.12
HttP42859 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
HttP42859 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HttP42859 Gm15785-201ENSMUST00000119145 694 ntBASIC1.82□□□□□ -2.12
HttP42859 Gm15244-201ENSMUST00000121122 130 ntBASIC1.82□□□□□ -2.12
HttP42859 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.82□□□□□ -2.12
HttP42859 Gm19335-201ENSMUST00000195836 2069 ntBASIC1.82□□□□□ -2.12
HttP42859 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC1.82□□□□□ -2.12
HttP42859 Gm14804-201ENSMUST00000122322 508 ntBASIC1.82□□□□□ -2.12
HttP42859 Gm22116-201ENSMUST00000158791 141 ntBASIC1.82□□□□□ -2.12
HttP42859 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.82□□□□□ -2.12
HttP42859 Gm27044-201ENSMUST00000183033 796 ntBASIC1.82□□□□□ -2.12
HttP42859 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HttP42859 Gm44555-201ENSMUST00000209008 148 ntBASIC1.82□□□□□ -2.12
HttP42859 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.82□□□□□ -2.12
HttP42859 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC1.82□□□□□ -2.12
HttP42859 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC1.82□□□□□ -2.12
HttP42859 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.82□□□□□ -2.12
HttP42859 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HttP42859 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HttP42859 Gm23015-201ENSMUST00000104145 128 ntBASIC1.81□□□□□ -2.12
HttP42859 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC1.81□□□□□ -2.12
HttP42859 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC1.81□□□□□ -2.12
HttP42859 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC1.81□□□□□ -2.12
HttP42859 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC1.81□□□□□ -2.12
HttP42859 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HttP42859 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HttP42859 Gm43379-201ENSMUST00000196253 7726 ntBASIC1.81□□□□□ -2.12
HttP42859 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HttP42859 Gm14923-201ENSMUST00000118270 155 ntBASIC1.81□□□□□ -2.12
HttP42859 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.81□□□□□ -2.12
HttP42859 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.81□□□□□ -2.12
HttP42859 Gm9375-201ENSMUST00000208899 903 ntBASIC1.81□□□□□ -2.12
HttP42859 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HttP42859 Gm37407-201ENSMUST00000194793 1316 ntBASIC1.81□□□□□ -2.12
HttP42859 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.8□□□□□ -2.12
HttP42859 Gm14415-201ENSMUST00000118260 1578 ntBASIC1.8□□□□□ -2.12
HttP42859 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.8□□□□□ -2.12
HttP42859 Mir7021-201ENSMUST00000197026 63 ntBASIC1.8□□□□□ -2.12
HttP42859 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.8□□□□□ -2.12
HttP42859 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HttP42859 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC1.8□□□□□ -2.12
HttP42859 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
HttP42859 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
HttP42859 Gm44370-201ENSMUST00000175436 112 ntBASIC1.8□□□□□ -2.12
HttP42859 Gm22565-201ENSMUST00000175540 69 ntBASIC1.8□□□□□ -2.12
HttP42859 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HttP42859 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HttP42859 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm25553-201ENSMUST00000158076 79 ntBASIC1.79□□□□□ -2.12
HttP42859 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm27163-201ENSMUST00000184767 409 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm6651-201ENSMUST00000189471 271 ntBASIC1.79□□□□□ -2.12
HttP42859 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm45048-201ENSMUST00000207058 429 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm17872-201ENSMUST00000222550 532 ntBASIC1.79□□□□□ -2.12
HttP42859 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HttP42859 Gm13510-201ENSMUST00000118659 429 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm12926-201ENSMUST00000121158 409 ntBASIC1.79□□□□□ -2.12
HttP42859 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm20542-201ENSMUST00000174582 372 ntBASIC1.79□□□□□ -2.12
HttP42859 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.79□□□□□ -2.12
HttP42859 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HttP42859 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.79□□□□□ -2.12
HttP42859 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
HttP42859 Gm22852-201ENSMUST00000177899 101 ntBASIC1.78□□□□□ -2.12
HttP42859 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.78□□□□□ -2.12
HttP42859 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.78□□□□□ -2.12
HttP42859 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.78□□□□□ -2.12
HttP42859 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HttP42859 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HttP42859 Gm24467-201ENSMUST00000157887 126 ntBASIC1.78□□□□□ -2.12
HttP42859 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.78□□□□□ -2.12
HttP42859 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.78□□□□□ -2.12
HttP42859 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.78□□□□□ -2.12
HttP42859 Gm24406-201ENSMUST00000083026 128 ntBASIC1.78□□□□□ -2.12
HttP42859 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HttP42859 Mir343-201ENSMUST00000102360 75 ntBASIC1.77□□□□□ -2.13
HttP42859 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HttP42859 Gm42465-201ENSMUST00000197036 492 ntBASIC1.77□□□□□ -2.13
HttP42859 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HttP42859 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HttP42859 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms